Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cul4aQ3TCH7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cul4aQ3TCH7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cul4aQ3TCH7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cul4aQ3TCH7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cul4aQ3TCH7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cul4aQ3TCH7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cul4aQ3TCH7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cul4aQ3TCH7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.78■□□□□ 0.6
Cul4aQ3TCH7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cul4aQ3TCH7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cul4aQ3TCH7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cul4aQ3TCH7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cul4aQ3TCH7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.78■□□□□ 0.6
Cul4aQ3TCH7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cul4aQ3TCH7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cul4aQ3TCH7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cul4aQ3TCH7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cul4aQ3TCH7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cul4aQ3TCH7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cul4aQ3TCH7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cul4aQ3TCH7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.77■□□□□ 0.6
Cul4aQ3TCH7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.77■□□□□ 0.6
Cul4aQ3TCH7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cul4aQ3TCH7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cul4aQ3TCH7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cul4aQ3TCH7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cul4aQ3TCH7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.77■□□□□ 0.6
Cul4aQ3TCH7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cul4aQ3TCH7 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cul4aQ3TCH7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cul4aQ3TCH7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cul4aQ3TCH7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cul4aQ3TCH7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cul4aQ3TCH7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cul4aQ3TCH7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cul4aQ3TCH7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cul4aQ3TCH7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cul4aQ3TCH7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cul4aQ3TCH7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cul4aQ3TCH7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cul4aQ3TCH7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cul4aQ3TCH7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cul4aQ3TCH7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cul4aQ3TCH7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cul4aQ3TCH7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.76■□□□□ 0.59
Cul4aQ3TCH7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cul4aQ3TCH7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cul4aQ3TCH7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cul4aQ3TCH7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cul4aQ3TCH7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cul4aQ3TCH7 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.75■□□□□ 0.59
Cul4aQ3TCH7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cul4aQ3TCH7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cul4aQ3TCH7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cul4aQ3TCH7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Cul4aQ3TCH7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cul4aQ3TCH7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.75■□□□□ 0.59
Cul4aQ3TCH7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.75■□□□□ 0.59
Cul4aQ3TCH7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cul4aQ3TCH7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.75■□□□□ 0.59
Cul4aQ3TCH7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cul4aQ3TCH7 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.75■□□□□ 0.59
Cul4aQ3TCH7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cul4aQ3TCH7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cul4aQ3TCH7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cul4aQ3TCH7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cul4aQ3TCH7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cul4aQ3TCH7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.74■□□□□ 0.59
Cul4aQ3TCH7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Cul4aQ3TCH7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cul4aQ3TCH7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cul4aQ3TCH7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.74■□□□□ 0.59
Cul4aQ3TCH7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.74■□□□□ 0.59
Cul4aQ3TCH7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.74■□□□□ 0.59
Cul4aQ3TCH7 Gm42642-201ENSMUST00000200683 355 ntBASIC18.74■□□□□ 0.59
Cul4aQ3TCH7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
Cul4aQ3TCH7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.74■□□□□ 0.59
Cul4aQ3TCH7 Gm18671-201ENSMUST00000214826 683 ntBASIC18.74■□□□□ 0.59
Cul4aQ3TCH7 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.74■□□□□ 0.59
Cul4aQ3TCH7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cul4aQ3TCH7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.74■□□□□ 0.59
Cul4aQ3TCH7 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.74■□□□□ 0.59
Cul4aQ3TCH7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cul4aQ3TCH7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cul4aQ3TCH7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cul4aQ3TCH7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cul4aQ3TCH7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cul4aQ3TCH7 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cul4aQ3TCH7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cul4aQ3TCH7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cul4aQ3TCH7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cul4aQ3TCH7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cul4aQ3TCH7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cul4aQ3TCH7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cul4aQ3TCH7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Cul4aQ3TCH7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.73■□□□□ 0.59
Cul4aQ3TCH7 AV356131-201ENSMUST00000206201 750 ntBASIC18.73■□□□□ 0.59
Cul4aQ3TCH7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cul4aQ3TCH7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms