Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pkd1l3Q2EG98 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pkd1l3Q2EG98 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pkd1l3Q2EG98 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pkd1l3Q2EG98 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pkd1l3Q2EG98 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pkd1l3Q2EG98 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pkd1l3Q2EG98 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pkd1l3Q2EG98 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pkd1l3Q2EG98 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pkd1l3Q2EG98 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pkd1l3Q2EG98 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pkd1l3Q2EG98 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pkd1l3Q2EG98 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pkd1l3Q2EG98 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.02■□□□□ 0.16
Pkd1l3Q2EG98 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pkd1l3Q2EG98 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pkd1l3Q2EG98 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pkd1l3Q2EG98 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.02■□□□□ 0.16
Pkd1l3Q2EG98 Gm30025-201ENSMUST00000218555 728 ntBASIC16.02■□□□□ 0.16
Pkd1l3Q2EG98 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pkd1l3Q2EG98 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pkd1l3Q2EG98 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pkd1l3Q2EG98 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pkd1l3Q2EG98 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pkd1l3Q2EG98 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pkd1l3Q2EG98 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pkd1l3Q2EG98 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pkd1l3Q2EG98 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pkd1l3Q2EG98 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pkd1l3Q2EG98 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
Pkd1l3Q2EG98 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.01■□□□□ 0.15
Pkd1l3Q2EG98 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pkd1l3Q2EG98 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.01■□□□□ 0.15
Pkd1l3Q2EG98 Odf3b-204ENSMUST00000227834 930 ntBASIC16.01■□□□□ 0.15
Pkd1l3Q2EG98 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pkd1l3Q2EG98 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.01■□□□□ 0.15
Pkd1l3Q2EG98 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pkd1l3Q2EG98 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pkd1l3Q2EG98 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
Pkd1l3Q2EG98 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pkd1l3Q2EG98 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Pkd1l3Q2EG98 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pkd1l3Q2EG98 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16■□□□□ 0.15
Pkd1l3Q2EG98 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pkd1l3Q2EG98 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pkd1l3Q2EG98 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pkd1l3Q2EG98 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16■□□□□ 0.15
Pkd1l3Q2EG98 Gm11539-201ENSMUST00000119837 557 ntBASIC16■□□□□ 0.15
Pkd1l3Q2EG98 Gm13436-201ENSMUST00000120418 567 ntBASIC16■□□□□ 0.15
Pkd1l3Q2EG98 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16■□□□□ 0.15
Pkd1l3Q2EG98 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pkd1l3Q2EG98 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Pkd1l3Q2EG98 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16■□□□□ 0.15
Pkd1l3Q2EG98 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pkd1l3Q2EG98 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16■□□□□ 0.15
Pkd1l3Q2EG98 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pkd1l3Q2EG98 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pkd1l3Q2EG98 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.99■□□□□ 0.15
Pkd1l3Q2EG98 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pkd1l3Q2EG98 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.99■□□□□ 0.15
Pkd1l3Q2EG98 Gm3375-201ENSMUST00000203929 796 ntBASIC15.99■□□□□ 0.15
Pkd1l3Q2EG98 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pkd1l3Q2EG98 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pkd1l3Q2EG98 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Pkd1l3Q2EG98 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pkd1l3Q2EG98 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Pkd1l3Q2EG98 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pkd1l3Q2EG98 Gm7889-201ENSMUST00000185591 958 ntBASIC15.99■□□□□ 0.15
Pkd1l3Q2EG98 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Pkd1l3Q2EG98 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pkd1l3Q2EG98 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pkd1l3Q2EG98 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pkd1l3Q2EG98 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pkd1l3Q2EG98 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pkd1l3Q2EG98 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Pkd1l3Q2EG98 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Pkd1l3Q2EG98 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pkd1l3Q2EG98 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pkd1l3Q2EG98 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pkd1l3Q2EG98 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pkd1l3Q2EG98 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pkd1l3Q2EG98 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pkd1l3Q2EG98 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pkd1l3Q2EG98 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pkd1l3Q2EG98 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pkd1l3Q2EG98 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pkd1l3Q2EG98 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pkd1l3Q2EG98 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pkd1l3Q2EG98 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
Pkd1l3Q2EG98 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.98■□□□□ 0.15
Pkd1l3Q2EG98 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.98■□□□□ 0.15
Pkd1l3Q2EG98 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.98■□□□□ 0.15
Pkd1l3Q2EG98 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pkd1l3Q2EG98 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.98■□□□□ 0.15
Pkd1l3Q2EG98 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pkd1l3Q2EG98 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.97■□□□□ 0.15
Pkd1l3Q2EG98 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pkd1l3Q2EG98 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pkd1l3Q2EG98 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms