Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim72Q1XH17 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim72Q1XH17 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim72Q1XH17 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Trim72Q1XH17 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim72Q1XH17 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim72Q1XH17 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim72Q1XH17 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim72Q1XH17 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim72Q1XH17 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Trim72Q1XH17 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim72Q1XH17 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim72Q1XH17 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
Trim72Q1XH17 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Trim72Q1XH17 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim72Q1XH17 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim72Q1XH17 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim72Q1XH17 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.07■□□□□ 0.64
Trim72Q1XH17 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim72Q1XH17 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim72Q1XH17 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.07■□□□□ 0.64
Trim72Q1XH17 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim72Q1XH17 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim72Q1XH17 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim72Q1XH17 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.07■□□□□ 0.64
Trim72Q1XH17 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim72Q1XH17 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim72Q1XH17 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim72Q1XH17 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Trim72Q1XH17 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim72Q1XH17 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim72Q1XH17 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim72Q1XH17 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim72Q1XH17 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim72Q1XH17 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Trim72Q1XH17 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim72Q1XH17 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim72Q1XH17 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim72Q1XH17 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.06■□□□□ 0.64
Trim72Q1XH17 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim72Q1XH17 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim72Q1XH17 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.06■□□□□ 0.64
Trim72Q1XH17 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim72Q1XH17 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim72Q1XH17 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim72Q1XH17 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim72Q1XH17 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Trim72Q1XH17 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim72Q1XH17 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim72Q1XH17 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.05■□□□□ 0.64
Trim72Q1XH17 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
Trim72Q1XH17 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim72Q1XH17 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim72Q1XH17 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim72Q1XH17 Gm10418-201ENSMUST00000100943 576 ntBASIC19.04■□□□□ 0.64
Trim72Q1XH17 Gm20049-201ENSMUST00000219950 730 ntBASIC19.04■□□□□ 0.64
Trim72Q1XH17 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.04■□□□□ 0.64
Trim72Q1XH17 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim72Q1XH17 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.03■□□□□ 0.64
Trim72Q1XH17 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.03■□□□□ 0.64
Trim72Q1XH17 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.03■□□□□ 0.64
Trim72Q1XH17 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim72Q1XH17 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim72Q1XH17 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Trim72Q1XH17 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim72Q1XH17 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim72Q1XH17 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Trim72Q1XH17 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim72Q1XH17 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.03■□□□□ 0.64
Trim72Q1XH17 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim72Q1XH17 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim72Q1XH17 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim72Q1XH17 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim72Q1XH17 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.03■□□□□ 0.64
Trim72Q1XH17 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim72Q1XH17 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim72Q1XH17 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim72Q1XH17 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Trim72Q1XH17 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.02■□□□□ 0.64
Trim72Q1XH17 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim72Q1XH17 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim72Q1XH17 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim72Q1XH17 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.02■□□□□ 0.64
Trim72Q1XH17 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim72Q1XH17 Gm11249-201ENSMUST00000117071 859 ntBASIC19.02■□□□□ 0.64
Trim72Q1XH17 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Trim72Q1XH17 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.02■□□□□ 0.64
Trim72Q1XH17 Gm10138-203ENSMUST00000206952 366 ntBASIC19.02■□□□□ 0.64
Trim72Q1XH17 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim72Q1XH17 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim72Q1XH17 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim72Q1XH17 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim72Q1XH17 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim72Q1XH17 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim72Q1XH17 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim72Q1XH17 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim72Q1XH17 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim72Q1XH17 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim72Q1XH17 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim72Q1XH17 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms