Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col19a1Q0VF58 Gm26039-201ENSMUST00000158152 144 ntBASIC19.14■□□□□ 0.65
Col19a1Q0VF58 Gm27459-201ENSMUST00000184860 107 ntBASIC19.14■□□□□ 0.65
Col19a1Q0VF58 Gm37935-201ENSMUST00000192012 982 ntBASIC19.14■□□□□ 0.65
Col19a1Q0VF58 AC132104.2-201ENSMUST00000215011 266 ntBASIC19.14■□□□□ 0.65
Col19a1Q0VF58 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col19a1Q0VF58 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col19a1Q0VF58 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col19a1Q0VF58 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col19a1Q0VF58 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Col19a1Q0VF58 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col19a1Q0VF58 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Col19a1Q0VF58 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col19a1Q0VF58 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Col19a1Q0VF58 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col19a1Q0VF58 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col19a1Q0VF58 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Col19a1Q0VF58 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col19a1Q0VF58 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col19a1Q0VF58 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col19a1Q0VF58 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Col19a1Q0VF58 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.13■□□□□ 0.65
Col19a1Q0VF58 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.13■□□□□ 0.65
Col19a1Q0VF58 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.12■□□□□ 0.65
Col19a1Q0VF58 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col19a1Q0VF58 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col19a1Q0VF58 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col19a1Q0VF58 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col19a1Q0VF58 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col19a1Q0VF58 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col19a1Q0VF58 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col19a1Q0VF58 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Col19a1Q0VF58 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.12■□□□□ 0.65
Col19a1Q0VF58 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col19a1Q0VF58 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col19a1Q0VF58 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col19a1Q0VF58 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col19a1Q0VF58 Gm11452-201ENSMUST00000122376 690 ntBASIC19.11■□□□□ 0.65
Col19a1Q0VF58 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col19a1Q0VF58 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col19a1Q0VF58 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.11■□□□□ 0.65
Col19a1Q0VF58 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Col19a1Q0VF58 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
Col19a1Q0VF58 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
Col19a1Q0VF58 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.11■□□□□ 0.65
Col19a1Q0VF58 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col19a1Q0VF58 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.11■□□□□ 0.65
Col19a1Q0VF58 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col19a1Q0VF58 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col19a1Q0VF58 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col19a1Q0VF58 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col19a1Q0VF58 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col19a1Q0VF58 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col19a1Q0VF58 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col19a1Q0VF58 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col19a1Q0VF58 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col19a1Q0VF58 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.1■□□□□ 0.65
Col19a1Q0VF58 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col19a1Q0VF58 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col19a1Q0VF58 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Col19a1Q0VF58 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Col19a1Q0VF58 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col19a1Q0VF58 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col19a1Q0VF58 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Col19a1Q0VF58 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Col19a1Q0VF58 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Col19a1Q0VF58 Gm43347-201ENSMUST00000200226 580 ntBASIC19.09■□□□□ 0.65
Col19a1Q0VF58 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.09■□□□□ 0.65
Col19a1Q0VF58 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col19a1Q0VF58 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.09■□□□□ 0.65
Col19a1Q0VF58 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Col19a1Q0VF58 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.09■□□□□ 0.65
Col19a1Q0VF58 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col19a1Q0VF58 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col19a1Q0VF58 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Col19a1Q0VF58 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col19a1Q0VF58 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col19a1Q0VF58 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col19a1Q0VF58 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Col19a1Q0VF58 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.08■□□□□ 0.64
Col19a1Q0VF58 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.08■□□□□ 0.64
Col19a1Q0VF58 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Col19a1Q0VF58 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col19a1Q0VF58 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.08■□□□□ 0.64
Col19a1Q0VF58 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col19a1Q0VF58 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col19a1Q0VF58 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
Col19a1Q0VF58 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col19a1Q0VF58 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col19a1Q0VF58 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col19a1Q0VF58 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col19a1Q0VF58 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Col19a1Q0VF58 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col19a1Q0VF58 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Col19a1Q0VF58 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col19a1Q0VF58 Gm18733-201ENSMUST00000173950 856 ntBASIC19.07■□□□□ 0.64
Col19a1Q0VF58 Gm37722-201ENSMUST00000193757 208 ntBASIC19.07■□□□□ 0.64
Col19a1Q0VF58 Gm18206-201ENSMUST00000207027 926 ntBASIC19.07■□□□□ 0.64
Col19a1Q0VF58 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col19a1Q0VF58 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms