Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox4Q06831 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox4Q06831 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox4Q06831 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.53■□□□□ 0.4
Sox4Q06831 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox4Q06831 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox4Q06831 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sox4Q06831 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox4Q06831 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox4Q06831 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sox4Q06831 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.53■□□□□ 0.4
Sox4Q06831 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.53■□□□□ 0.4
Sox4Q06831 Mir6349-201ENSMUST00000184059 97 ntBASIC17.53■□□□□ 0.4
Sox4Q06831 Gm42545-201ENSMUST00000202755 922 ntBASIC17.53■□□□□ 0.4
Sox4Q06831 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.53■□□□□ 0.4
Sox4Q06831 Gm18025-201ENSMUST00000221733 862 ntBASIC17.53■□□□□ 0.4
Sox4Q06831 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox4Q06831 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox4Q06831 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox4Q06831 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.53■□□□□ 0.4
Sox4Q06831 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox4Q06831 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Sox4Q06831 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Sox4Q06831 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.53■□□□□ 0.4
Sox4Q06831 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox4Q06831 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Sox4Q06831 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox4Q06831 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox4Q06831 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox4Q06831 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox4Q06831 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.52■□□□□ 0.4
Sox4Q06831 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sox4Q06831 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sox4Q06831 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox4Q06831 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox4Q06831 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox4Q06831 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox4Q06831 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.52■□□□□ 0.4
Sox4Q06831 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox4Q06831 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.52■□□□□ 0.4
Sox4Q06831 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Sox4Q06831 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.52■□□□□ 0.4
Sox4Q06831 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sox4Q06831 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox4Q06831 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox4Q06831 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sox4Q06831 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox4Q06831 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sox4Q06831 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sox4Q06831 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sox4Q06831 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.52■□□□□ 0.39
Sox4Q06831 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox4Q06831 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox4Q06831 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox4Q06831 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox4Q06831 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.51■□□□□ 0.39
Sox4Q06831 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.51■□□□□ 0.39
Sox4Q06831 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.51■□□□□ 0.39
Sox4Q06831 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.51■□□□□ 0.39
Sox4Q06831 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.51■□□□□ 0.39
Sox4Q06831 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox4Q06831 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox4Q06831 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Sox4Q06831 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Sox4Q06831 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox4Q06831 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox4Q06831 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox4Q06831 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox4Q06831 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sox4Q06831 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox4Q06831 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sox4Q06831 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox4Q06831 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sox4Q06831 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.5■□□□□ 0.39
Sox4Q06831 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.5■□□□□ 0.39
Sox4Q06831 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox4Q06831 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Sox4Q06831 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox4Q06831 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox4Q06831 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox4Q06831 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox4Q06831 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Sox4Q06831 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sox4Q06831 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Sox4Q06831 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox4Q06831 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Sox4Q06831 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox4Q06831 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.49■□□□□ 0.39
Sox4Q06831 Gm43183-201ENSMUST00000200632 547 ntBASIC17.49■□□□□ 0.39
Sox4Q06831 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.49■□□□□ 0.39
Sox4Q06831 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sox4Q06831 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox4Q06831 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Sox4Q06831 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox4Q06831 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox4Q06831 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox4Q06831 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox4Q06831 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox4Q06831 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox4Q06831 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms