Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Smn1P97801 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Smn1P97801 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smn1P97801 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smn1P97801 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smn1P97801 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smn1P97801 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smn1P97801 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Smn1P97801 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smn1P97801 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smn1P97801 Gm43017-201ENSMUST00000198296 752 ntBASIC15.35■□□□□ 0.05
Smn1P97801 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smn1P97801 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Smn1P97801 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.35■□□□□ 0.05
Smn1P97801 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Smn1P97801 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smn1P97801 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Smn1P97801 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smn1P97801 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smn1P97801 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Smn1P97801 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smn1P97801 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smn1P97801 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Smn1P97801 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Smn1P97801 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smn1P97801 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Smn1P97801 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smn1P97801 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smn1P97801 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smn1P97801 Gm12821-201ENSMUST00000120022 600 ntBASIC15.34■□□□□ 0.05
Smn1P97801 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smn1P97801 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Smn1P97801 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.34■□□□□ 0.05
Smn1P97801 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smn1P97801 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Smn1P97801 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smn1P97801 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smn1P97801 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smn1P97801 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
Smn1P97801 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smn1P97801 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Smn1P97801 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Smn1P97801 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smn1P97801 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Smn1P97801 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smn1P97801 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.33■□□□□ 0.05
Smn1P97801 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Smn1P97801 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smn1P97801 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smn1P97801 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.33■□□□□ 0.04
Smn1P97801 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.33■□□□□ 0.04
Smn1P97801 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smn1P97801 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smn1P97801 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smn1P97801 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Smn1P97801 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smn1P97801 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smn1P97801 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smn1P97801 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.33■□□□□ 0.04
Smn1P97801 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smn1P97801 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smn1P97801 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smn1P97801 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smn1P97801 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smn1P97801 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smn1P97801 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smn1P97801 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smn1P97801 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Smn1P97801 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Smn1P97801 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smn1P97801 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smn1P97801 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Smn1P97801 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
Smn1P97801 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smn1P97801 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smn1P97801 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smn1P97801 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smn1P97801 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smn1P97801 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smn1P97801 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.31■□□□□ 0.04
Smn1P97801 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smn1P97801 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smn1P97801 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.31■□□□□ 0.04
Smn1P97801 Cdc34b-202ENSMUST00000188741 1252 ntBASIC15.31■□□□□ 0.04
Smn1P97801 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smn1P97801 Gm45417-201ENSMUST00000209533 758 ntBASIC15.31■□□□□ 0.04
Smn1P97801 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Smn1P97801 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smn1P97801 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.31■□□□□ 0.04
Smn1P97801 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smn1P97801 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smn1P97801 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Smn1P97801 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smn1P97801 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smn1P97801 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Smn1P97801 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.31■□□□□ 0.04
Smn1P97801 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smn1P97801 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Smn1P97801 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smn1P97801 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms