Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ldb1P70662 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ldb1P70662 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ldb1P70662 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ldb1P70662 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ldb1P70662 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ldb1P70662 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ldb1P70662 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ldb1P70662 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ldb1P70662 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ldb1P70662 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.8■□□□□ 0.44
Ldb1P70662 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.8■□□□□ 0.44
Ldb1P70662 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ldb1P70662 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ldb1P70662 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ldb1P70662 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
Ldb1P70662 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.8■□□□□ 0.44
Ldb1P70662 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ldb1P70662 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
Ldb1P70662 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ldb1P70662 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.79■□□□□ 0.44
Ldb1P70662 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ldb1P70662 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ldb1P70662 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.79■□□□□ 0.44
Ldb1P70662 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ldb1P70662 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.79■□□□□ 0.44
Ldb1P70662 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ldb1P70662 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.79■□□□□ 0.44
Ldb1P70662 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ldb1P70662 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ldb1P70662 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ldb1P70662 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ldb1P70662 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.78■□□□□ 0.44
Ldb1P70662 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ldb1P70662 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ldb1P70662 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.78■□□□□ 0.44
Ldb1P70662 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ldb1P70662 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ldb1P70662 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ldb1P70662 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ldb1P70662 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ldb1P70662 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ldb1P70662 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ldb1P70662 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ldb1P70662 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ldb1P70662 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Ldb1P70662 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ldb1P70662 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Ldb1P70662 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ldb1P70662 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ldb1P70662 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Ldb1P70662 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ldb1P70662 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ldb1P70662 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.77■□□□□ 0.44
Ldb1P70662 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ldb1P70662 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.77■□□□□ 0.44
Ldb1P70662 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ldb1P70662 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.77■□□□□ 0.44
Ldb1P70662 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.77■□□□□ 0.44
Ldb1P70662 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.77■□□□□ 0.44
Ldb1P70662 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.77■□□□□ 0.44
Ldb1P70662 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ldb1P70662 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Ldb1P70662 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ldb1P70662 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ldb1P70662 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ldb1P70662 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ldb1P70662 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.77■□□□□ 0.44
Ldb1P70662 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ldb1P70662 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.77■□□□□ 0.43
Ldb1P70662 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.77■□□□□ 0.43
Ldb1P70662 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ldb1P70662 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ldb1P70662 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ldb1P70662 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ldb1P70662 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ldb1P70662 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ldb1P70662 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ldb1P70662 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.76■□□□□ 0.43
Ldb1P70662 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.76■□□□□ 0.43
Ldb1P70662 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ldb1P70662 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ldb1P70662 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ldb1P70662 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ldb1P70662 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ldb1P70662 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ldb1P70662 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ldb1P70662 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ldb1P70662 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ldb1P70662 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ldb1P70662 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ldb1P70662 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ldb1P70662 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ldb1P70662 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ldb1P70662 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ldb1P70662 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.75■□□□□ 0.43
Ldb1P70662 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ldb1P70662 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ldb1P70662 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ldb1P70662 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms