Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six5P70178 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Six5P70178 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six5P70178 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Six5P70178 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six5P70178 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Six5P70178 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Six5P70178 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Six5P70178 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Six5P70178 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Six5P70178 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Six5P70178 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.74■□□□□ 0.27
Six5P70178 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Six5P70178 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Six5P70178 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Six5P70178 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six5P70178 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six5P70178 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Six5P70178 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six5P70178 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Six5P70178 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six5P70178 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Six5P70178 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Six5P70178 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six5P70178 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six5P70178 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six5P70178 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Six5P70178 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.73■□□□□ 0.27
Six5P70178 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six5P70178 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six5P70178 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six5P70178 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.72■□□□□ 0.27
Six5P70178 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Six5P70178 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six5P70178 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.72■□□□□ 0.27
Six5P70178 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.72■□□□□ 0.27
Six5P70178 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.72■□□□□ 0.27
Six5P70178 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.72■□□□□ 0.27
Six5P70178 Gm20049-201ENSMUST00000219950 730 ntBASIC16.72■□□□□ 0.27
Six5P70178 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six5P70178 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Six5P70178 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Six5P70178 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six5P70178 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.72■□□□□ 0.27
Six5P70178 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Six5P70178 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six5P70178 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six5P70178 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six5P70178 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six5P70178 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six5P70178 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six5P70178 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six5P70178 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six5P70178 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six5P70178 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.71■□□□□ 0.27
Six5P70178 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six5P70178 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six5P70178 Gm12896-201ENSMUST00000118430 226 ntBASIC16.71■□□□□ 0.27
Six5P70178 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.71■□□□□ 0.27
Six5P70178 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.71■□□□□ 0.27
Six5P70178 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six5P70178 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six5P70178 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six5P70178 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six5P70178 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Six5P70178 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
Six5P70178 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six5P70178 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Six5P70178 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Six5P70178 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six5P70178 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six5P70178 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Six5P70178 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six5P70178 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.7■□□□□ 0.26
Six5P70178 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six5P70178 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six5P70178 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Six5P70178 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six5P70178 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six5P70178 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Six5P70178 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six5P70178 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Six5P70178 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six5P70178 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.69■□□□□ 0.26
Six5P70178 Gm29257-201ENSMUST00000186115 639 ntBASIC16.69■□□□□ 0.26
Six5P70178 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six5P70178 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six5P70178 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six5P70178 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six5P70178 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Six5P70178 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.69■□□□□ 0.26
Six5P70178 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six5P70178 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six5P70178 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six5P70178 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six5P70178 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six5P70178 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six5P70178 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six5P70178 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six5P70178 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms