Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Gm16061-201ENSMUST00000122167 857 ntBASIC20.53■□□□□ 0.88
Mmp20P57748 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp20P57748 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp20P57748 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp20P57748 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.53■□□□□ 0.88
Mmp20P57748 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp20P57748 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp20P57748 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Mmp20P57748 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp20P57748 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Mmp20P57748 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.53■□□□□ 0.88
Mmp20P57748 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp20P57748 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp20P57748 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp20P57748 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp20P57748 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp20P57748 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.52■□□□□ 0.88
Mmp20P57748 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.52■□□□□ 0.88
Mmp20P57748 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp20P57748 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp20P57748 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Mmp20P57748 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Mmp20P57748 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp20P57748 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp20P57748 Gm14859-201ENSMUST00000117752 357 ntBASIC20.51■□□□□ 0.87
Mmp20P57748 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.51■□□□□ 0.87
Mmp20P57748 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp20P57748 Ank2-226ENSMUST00000189368 339 ntBASIC20.51■□□□□ 0.87
Mmp20P57748 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp20P57748 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Mmp20P57748 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.51■□□□□ 0.87
Mmp20P57748 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp20P57748 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp20P57748 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp20P57748 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp20P57748 Gm7638-201ENSMUST00000121348 967 ntBASIC20.5■□□□□ 0.87
Mmp20P57748 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp20P57748 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp20P57748 Gm25016-201ENSMUST00000158399 131 ntBASIC20.5■□□□□ 0.87
Mmp20P57748 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp20P57748 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp20P57748 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp20P57748 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp20P57748 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp20P57748 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp20P57748 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp20P57748 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp20P57748 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.5■□□□□ 0.87
Mmp20P57748 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp20P57748 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp20P57748 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp20P57748 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp20P57748 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.49■□□□□ 0.87
Mmp20P57748 Gm7791-201ENSMUST00000219066 539 ntBASIC20.49■□□□□ 0.87
Mmp20P57748 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp20P57748 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp20P57748 BC021767-201ENSMUST00000126387 1716 ntBASIC20.49■□□□□ 0.87
Mmp20P57748 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
Mmp20P57748 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp20P57748 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp20P57748 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.48■□□□□ 0.87
Mmp20P57748 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp20P57748 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Mmp20P57748 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp20P57748 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp20P57748 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Mmp20P57748 Gm9103-201ENSMUST00000119371 405 ntBASIC20.48■□□□□ 0.87
Mmp20P57748 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp20P57748 Gm24841-201ENSMUST00000158676 357 ntBASIC20.48■□□□□ 0.87
Mmp20P57748 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp20P57748 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Mmp20P57748 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp20P57748 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp20P57748 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp20P57748 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.48■□□□□ 0.87
Mmp20P57748 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp20P57748 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp20P57748 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp20P57748 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.47■□□□□ 0.87
Mmp20P57748 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp20P57748 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp20P57748 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp20P57748 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp20P57748 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp20P57748 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp20P57748 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.47■□□□□ 0.87
Mmp20P57748 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp20P57748 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp20P57748 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.46■□□□□ 0.87
Mmp20P57748 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp20P57748 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.46■□□□□ 0.87
Mmp20P57748 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp20P57748 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp20P57748 Gm13401-201ENSMUST00000117074 291 ntBASIC20.46■□□□□ 0.87
Mmp20P57748 Gm13474-201ENSMUST00000122466 815 ntBASIC20.46■□□□□ 0.87
Mmp20P57748 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp20P57748 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp20P57748 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp20P57748 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Mmp20P57748 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms