Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Usp25P57080 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Usp25P57080 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp25P57080 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Usp25P57080 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.26■□□□□ 0.83
Usp25P57080 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp25P57080 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp25P57080 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp25P57080 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Usp25P57080 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp25P57080 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.26■□□□□ 0.83
Usp25P57080 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp25P57080 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.26■□□□□ 0.83
Usp25P57080 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp25P57080 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp25P57080 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp25P57080 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp25P57080 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp25P57080 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp25P57080 Gm43060-201ENSMUST00000200621 289 ntBASIC20.25■□□□□ 0.83
Usp25P57080 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.25■□□□□ 0.83
Usp25P57080 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp25P57080 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Usp25P57080 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp25P57080 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp25P57080 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.25■□□□□ 0.83
Usp25P57080 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp25P57080 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Usp25P57080 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp25P57080 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp25P57080 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp25P57080 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp25P57080 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp25P57080 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp25P57080 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.24■□□□□ 0.83
Usp25P57080 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp25P57080 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp25P57080 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp25P57080 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Usp25P57080 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.24■□□□□ 0.83
Usp25P57080 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.24■□□□□ 0.83
Usp25P57080 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.24■□□□□ 0.83
Usp25P57080 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Usp25P57080 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.24■□□□□ 0.83
Usp25P57080 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.24■□□□□ 0.83
Usp25P57080 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp25P57080 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp25P57080 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp25P57080 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Usp25P57080 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.24■□□□□ 0.83
Usp25P57080 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Usp25P57080 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Usp25P57080 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Usp25P57080 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp25P57080 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp25P57080 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Usp25P57080 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp25P57080 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp25P57080 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp25P57080 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Usp25P57080 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp25P57080 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Usp25P57080 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp25P57080 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Usp25P57080 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp25P57080 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp25P57080 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC20.22■□□□□ 0.83
Usp25P57080 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.22■□□□□ 0.83
Usp25P57080 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Usp25P57080 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp25P57080 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Usp25P57080 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Usp25P57080 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Usp25P57080 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.22■□□□□ 0.83
Usp25P57080 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Usp25P57080 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp25P57080 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Usp25P57080 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp25P57080 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Usp25P57080 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp25P57080 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp25P57080 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.21■□□□□ 0.83
Usp25P57080 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.21■□□□□ 0.83
Usp25P57080 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Usp25P57080 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp25P57080 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp25P57080 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Usp25P57080 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.83
Usp25P57080 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp25P57080 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp25P57080 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp25P57080 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp25P57080 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp25P57080 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Usp25P57080 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Usp25P57080 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.2■□□□□ 0.82
Usp25P57080 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Usp25P57080 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp25P57080 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.2■□□□□ 0.82
Usp25P57080 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms