Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx6P54823 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx6P54823 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx6P54823 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx6P54823 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ddx6P54823 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx6P54823 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx6P54823 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx6P54823 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx6P54823 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ddx6P54823 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx6P54823 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx6P54823 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx6P54823 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx6P54823 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.19■□□□□ 0.5
Ddx6P54823 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx6P54823 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx6P54823 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx6P54823 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.19■□□□□ 0.5
Ddx6P54823 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.19■□□□□ 0.5
Ddx6P54823 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx6P54823 Gm18959-201ENSMUST00000208954 655 ntBASIC18.19■□□□□ 0.5
Ddx6P54823 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx6P54823 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx6P54823 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx6P54823 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Ddx6P54823 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx6P54823 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.18■□□□□ 0.5
Ddx6P54823 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx6P54823 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.18■□□□□ 0.5
Ddx6P54823 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx6P54823 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx6P54823 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx6P54823 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.18■□□□□ 0.5
Ddx6P54823 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx6P54823 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx6P54823 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx6P54823 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx6P54823 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.17■□□□□ 0.5
Ddx6P54823 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.17■□□□□ 0.5
Ddx6P54823 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx6P54823 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Ddx6P54823 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx6P54823 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx6P54823 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Ddx6P54823 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx6P54823 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx6P54823 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.16■□□□□ 0.5
Ddx6P54823 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.16■□□□□ 0.5
Ddx6P54823 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx6P54823 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx6P54823 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx6P54823 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx6P54823 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.16■□□□□ 0.5
Ddx6P54823 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx6P54823 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx6P54823 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ddx6P54823 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx6P54823 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx6P54823 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ddx6P54823 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx6P54823 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx6P54823 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx6P54823 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ddx6P54823 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ddx6P54823 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx6P54823 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx6P54823 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx6P54823 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.15■□□□□ 0.5
Ddx6P54823 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Ddx6P54823 Gm45058-201ENSMUST00000205810 766 ntBASIC18.15■□□□□ 0.5
Ddx6P54823 Gm29791-202ENSMUST00000207888 369 ntBASIC18.15■□□□□ 0.5
Ddx6P54823 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ddx6P54823 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx6P54823 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx6P54823 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx6P54823 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ddx6P54823 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ddx6P54823 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ddx6P54823 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ddx6P54823 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Ddx6P54823 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.14■□□□□ 0.49
Ddx6P54823 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Ddx6P54823 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx6P54823 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.14■□□□□ 0.49
Ddx6P54823 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx6P54823 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx6P54823 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx6P54823 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Ddx6P54823 Gm2274-201ENSMUST00000184539 609 ntBASIC18.14■□□□□ 0.49
Ddx6P54823 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.14■□□□□ 0.49
Ddx6P54823 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx6P54823 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx6P54823 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Ddx6P54823 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx6P54823 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx6P54823 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.14■□□□□ 0.49
Ddx6P54823 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Ddx6P54823 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx6P54823 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms