Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdx1P52946 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdx1P52946 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pdx1P52946 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdx1P52946 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pdx1P52946 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdx1P52946 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdx1P52946 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pdx1P52946 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pdx1P52946 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdx1P52946 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Pdx1P52946 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdx1P52946 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdx1P52946 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdx1P52946 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdx1P52946 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdx1P52946 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pdx1P52946 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdx1P52946 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdx1P52946 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Pdx1P52946 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.69■□□□□ 0.42
Pdx1P52946 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdx1P52946 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdx1P52946 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdx1P52946 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdx1P52946 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.69■□□□□ 0.42
Pdx1P52946 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdx1P52946 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.69■□□□□ 0.42
Pdx1P52946 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdx1P52946 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdx1P52946 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdx1P52946 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Pdx1P52946 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdx1P52946 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.68■□□□□ 0.42
Pdx1P52946 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pdx1P52946 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pdx1P52946 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pdx1P52946 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.68■□□□□ 0.42
Pdx1P52946 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pdx1P52946 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Pdx1P52946 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdx1P52946 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdx1P52946 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdx1P52946 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdx1P52946 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdx1P52946 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdx1P52946 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.67■□□□□ 0.42
Pdx1P52946 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.67■□□□□ 0.42
Pdx1P52946 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.67■□□□□ 0.42
Pdx1P52946 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdx1P52946 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pdx1P52946 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdx1P52946 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdx1P52946 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdx1P52946 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdx1P52946 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pdx1P52946 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pdx1P52946 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdx1P52946 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdx1P52946 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdx1P52946 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pdx1P52946 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.66■□□□□ 0.42
Pdx1P52946 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.66■□□□□ 0.42
Pdx1P52946 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdx1P52946 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdx1P52946 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pdx1P52946 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pdx1P52946 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdx1P52946 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.65■□□□□ 0.42
Pdx1P52946 Rarb-207ENSMUST00000225921 2756 ntBASIC17.65■□□□□ 0.42
Pdx1P52946 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pdx1P52946 Gm27011-201ENSMUST00000182352 972 ntBASIC17.65■□□□□ 0.42
Pdx1P52946 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.65■□□□□ 0.42
Pdx1P52946 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.65■□□□□ 0.42
Pdx1P52946 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pdx1P52946 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdx1P52946 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdx1P52946 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
Pdx1P52946 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdx1P52946 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdx1P52946 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Pdx1P52946 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdx1P52946 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdx1P52946 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdx1P52946 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.64■□□□□ 0.41
Pdx1P52946 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdx1P52946 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdx1P52946 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdx1P52946 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.64■□□□□ 0.41
Pdx1P52946 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdx1P52946 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pdx1P52946 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pdx1P52946 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdx1P52946 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pdx1P52946 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdx1P52946 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pdx1P52946 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdx1P52946 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdx1P52946 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pdx1P52946 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms