Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga2P52927 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga2P52927 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga2P52927 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga2P52927 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga2P52927 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.24■□□□□ 0.03
Hmga2P52927 Gm40848-201ENSMUST00000221998 324 ntBASIC15.24■□□□□ 0.03
Hmga2P52927 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga2P52927 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.24■□□□□ 0.03
Hmga2P52927 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga2P52927 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga2P52927 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.24■□□□□ 0.03
Hmga2P52927 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga2P52927 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.24■□□□□ 0.03
Hmga2P52927 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga2P52927 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Hmga2P52927 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga2P52927 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Hmga2P52927 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga2P52927 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga2P52927 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga2P52927 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmga2P52927 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Hmga2P52927 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Hmga2P52927 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.23■□□□□ 0.03
Hmga2P52927 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmga2P52927 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmga2P52927 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Hmga2P52927 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmga2P52927 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Hmga2P52927 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmga2P52927 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmga2P52927 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmga2P52927 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hmga2P52927 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC15.23■□□□□ 0.03
Hmga2P52927 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.23■□□□□ 0.03
Hmga2P52927 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hmga2P52927 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Hmga2P52927 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmga2P52927 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmga2P52927 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmga2P52927 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmga2P52927 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hmga2P52927 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.23■□□□□ 0.03
Hmga2P52927 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmga2P52927 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmga2P52927 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmga2P52927 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmga2P52927 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hmga2P52927 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmga2P52927 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.22■□□□□ 0.03
Hmga2P52927 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.22■□□□□ 0.03
Hmga2P52927 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmga2P52927 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmga2P52927 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmga2P52927 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.22■□□□□ 0.03
Hmga2P52927 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hmga2P52927 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmga2P52927 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hmga2P52927 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmga2P52927 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmga2P52927 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmga2P52927 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Hmga2P52927 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmga2P52927 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Hmga2P52927 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmga2P52927 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmga2P52927 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmga2P52927 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmga2P52927 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Hmga2P52927 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.21■□□□□ 0.03
Hmga2P52927 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmga2P52927 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmga2P52927 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmga2P52927 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hmga2P52927 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hmga2P52927 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmga2P52927 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmga2P52927 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmga2P52927 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmga2P52927 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hmga2P52927 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Hmga2P52927 Gm6139-201ENSMUST00000079261 882 ntBASIC15.21■□□□□ 0.03
Hmga2P52927 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.21■□□□□ 0.03
Hmga2P52927 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmga2P52927 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmga2P52927 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Hmga2P52927 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmga2P52927 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Hmga2P52927 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmga2P52927 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmga2P52927 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Hmga2P52927 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmga2P52927 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmga2P52927 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmga2P52927 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Hmga2P52927 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmga2P52927 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Hmga2P52927 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hmga2P52927 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms