Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
SftpdP50404 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SftpdP50404 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SftpdP50404 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SftpdP50404 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SftpdP50404 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SftpdP50404 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.84■□□□□ 0.61
SftpdP50404 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SftpdP50404 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SftpdP50404 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SftpdP50404 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SftpdP50404 Mtag2-201ENSMUST00000058665 714 ntBASIC18.84■□□□□ 0.61
SftpdP50404 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SftpdP50404 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SftpdP50404 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
SftpdP50404 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
SftpdP50404 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SftpdP50404 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
SftpdP50404 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SftpdP50404 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SftpdP50404 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SftpdP50404 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SftpdP50404 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SftpdP50404 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SftpdP50404 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SftpdP50404 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SftpdP50404 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.83■□□□□ 0.6
SftpdP50404 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SftpdP50404 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SftpdP50404 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SftpdP50404 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SftpdP50404 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SftpdP50404 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.82■□□□□ 0.6
SftpdP50404 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SftpdP50404 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SftpdP50404 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SftpdP50404 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SftpdP50404 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SftpdP50404 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SftpdP50404 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SftpdP50404 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SftpdP50404 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SftpdP50404 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SftpdP50404 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SftpdP50404 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SftpdP50404 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SftpdP50404 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SftpdP50404 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.82■□□□□ 0.6
SftpdP50404 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SftpdP50404 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.82■□□□□ 0.6
SftpdP50404 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SftpdP50404 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SftpdP50404 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
SftpdP50404 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.81■□□□□ 0.6
SftpdP50404 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.81■□□□□ 0.6
SftpdP50404 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SftpdP50404 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SftpdP50404 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SftpdP50404 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SftpdP50404 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SftpdP50404 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SftpdP50404 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SftpdP50404 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SftpdP50404 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
SftpdP50404 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SftpdP50404 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SftpdP50404 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
SftpdP50404 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SftpdP50404 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
SftpdP50404 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SftpdP50404 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SftpdP50404 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SftpdP50404 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.8■□□□□ 0.6
SftpdP50404 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SftpdP50404 Gm37856-201ENSMUST00000191634 999 ntBASIC18.8■□□□□ 0.6
SftpdP50404 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.8■□□□□ 0.6
SftpdP50404 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.8■□□□□ 0.6
SftpdP50404 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SftpdP50404 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SftpdP50404 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SftpdP50404 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SftpdP50404 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SftpdP50404 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SftpdP50404 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.79■□□□□ 0.6
SftpdP50404 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SftpdP50404 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SftpdP50404 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.79■□□□□ 0.6
SftpdP50404 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SftpdP50404 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SftpdP50404 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SftpdP50404 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.79■□□□□ 0.6
SftpdP50404 Trmt13-210ENSMUST00000198454 880 ntBASIC18.79■□□□□ 0.6
SftpdP50404 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.79■□□□□ 0.6
SftpdP50404 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SftpdP50404 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SftpdP50404 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SftpdP50404 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SftpdP50404 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SftpdP50404 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SftpdP50404 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms