Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Nkx2-1P50220 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-1P50220 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-1P50220 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-1P50220 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Nkx2-1P50220 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-1P50220 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-1P50220 Gm12251-201ENSMUST00000117893 792 ntBASIC14.85□□□□□ -0.03
Nkx2-1P50220 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Nkx2-1P50220 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-1P50220 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-1P50220 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Nkx2-1P50220 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-1P50220 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.85□□□□□ -0.03
Nkx2-1P50220 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-1P50220 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-1P50220 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.85□□□□□ -0.03
Nkx2-1P50220 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-1P50220 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-1P50220 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-1P50220 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-1P50220 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-1P50220 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-1P50220 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Nkx2-1P50220 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Nkx2-1P50220 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-1P50220 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-1P50220 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-1P50220 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Nkx2-1P50220 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.84□□□□□ -0.03
Nkx2-1P50220 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Nkx2-1P50220 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.84□□□□□ -0.03
Nkx2-1P50220 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-1P50220 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.84□□□□□ -0.03
Nkx2-1P50220 Gm8493-201ENSMUST00000196881 489 ntBASIC14.84□□□□□ -0.03
Nkx2-1P50220 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.84□□□□□ -0.03
Nkx2-1P50220 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.84□□□□□ -0.03
Nkx2-1P50220 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-1P50220 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-1P50220 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-1P50220 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-1P50220 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-1P50220 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-1P50220 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-1P50220 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Nkx2-1P50220 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Nkx2-1P50220 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.83□□□□□ -0.04
Nkx2-1P50220 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-1P50220 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-1P50220 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-1P50220 Tgds-204ENSMUST00000228543 1594 ntBASIC14.83□□□□□ -0.04
Nkx2-1P50220 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-1P50220 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-1P50220 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-1P50220 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-1P50220 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.83□□□□□ -0.04
Nkx2-1P50220 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-1P50220 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-1P50220 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-1P50220 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-1P50220 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Nkx2-1P50220 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Nkx2-1P50220 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-1P50220 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-1P50220 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-1P50220 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-1P50220 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-1P50220 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-1P50220 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Nkx2-1P50220 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-1P50220 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-1P50220 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-1P50220 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-1P50220 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-1P50220 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-1P50220 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Nkx2-1P50220 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-1P50220 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.82□□□□□ -0.04
Nkx2-1P50220 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-1P50220 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.82□□□□□ -0.04
Nkx2-1P50220 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-1P50220 Gm11421-201ENSMUST00000122124 294 ntBASIC14.82□□□□□ -0.04
Nkx2-1P50220 Gm27801-201ENSMUST00000184174 223 ntBASIC14.82□□□□□ -0.04
Nkx2-1P50220 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.82□□□□□ -0.04
Nkx2-1P50220 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-1P50220 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Nkx2-1P50220 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-1P50220 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-1P50220 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-1P50220 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-1P50220 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-1P50220 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-1P50220 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Nkx2-1P50220 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-1P50220 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-1P50220 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-1P50220 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-1P50220 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-1P50220 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-1P50220 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms