Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Xcl1P47993 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.75□□□□□ -0.53
Xcl1P47993 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC11.75□□□□□ -0.53
Xcl1P47993 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Xcl1P47993 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC11.75□□□□□ -0.53
Xcl1P47993 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Xcl1P47993 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Xcl1P47993 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xcl1P47993 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xcl1P47993 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xcl1P47993 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Xcl1P47993 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xcl1P47993 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Xcl1P47993 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC11.74□□□□□ -0.53
Xcl1P47993 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xcl1P47993 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC11.74□□□□□ -0.53
Xcl1P47993 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xcl1P47993 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xcl1P47993 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Xcl1P47993 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC11.74□□□□□ -0.53
Xcl1P47993 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xcl1P47993 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xcl1P47993 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xcl1P47993 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xcl1P47993 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xcl1P47993 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xcl1P47993 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xcl1P47993 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xcl1P47993 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Xcl1P47993 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xcl1P47993 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xcl1P47993 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xcl1P47993 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xcl1P47993 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Xcl1P47993 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Xcl1P47993 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Xcl1P47993 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Xcl1P47993 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Xcl1P47993 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Xcl1P47993 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Xcl1P47993 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Xcl1P47993 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Xcl1P47993 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Xcl1P47993 Gm45906-201ENSMUST00000208911 1430 ntBASIC11.73□□□□□ -0.53
Xcl1P47993 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Xcl1P47993 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Xcl1P47993 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Xcl1P47993 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Xcl1P47993 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Xcl1P47993 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC11.72□□□□□ -0.53
Xcl1P47993 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Xcl1P47993 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Xcl1P47993 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Xcl1P47993 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Xcl1P47993 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Xcl1P47993 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Xcl1P47993 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Xcl1P47993 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC11.72□□□□□ -0.53
Xcl1P47993 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Xcl1P47993 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC11.72□□□□□ -0.53
Xcl1P47993 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Xcl1P47993 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC11.72□□□□□ -0.53
Xcl1P47993 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Xcl1P47993 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Xcl1P47993 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Xcl1P47993 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Xcl1P47993 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Xcl1P47993 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Xcl1P47993 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.72□□□□□ -0.53
Xcl1P47993 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Xcl1P47993 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Xcl1P47993 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Xcl1P47993 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.72□□□□□ -0.53
Xcl1P47993 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Xcl1P47993 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Xcl1P47993 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Xcl1P47993 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Xcl1P47993 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Xcl1P47993 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Xcl1P47993 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC11.72□□□□□ -0.53
Xcl1P47993 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Xcl1P47993 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Xcl1P47993 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Xcl1P47993 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Xcl1P47993 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Xcl1P47993 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Xcl1P47993 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Xcl1P47993 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Xcl1P47993 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Xcl1P47993 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Xcl1P47993 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Xcl1P47993 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Xcl1P47993 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Xcl1P47993 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Xcl1P47993 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Xcl1P47993 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Xcl1P47993 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Xcl1P47993 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Xcl1P47993 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
Xcl1P47993 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms