Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rph3aP47708 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rph3aP47708 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rph3aP47708 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rph3aP47708 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rph3aP47708 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rph3aP47708 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.22■□□□□ 0.35
Rph3aP47708 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rph3aP47708 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rph3aP47708 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.21■□□□□ 0.35
Rph3aP47708 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Rph3aP47708 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rph3aP47708 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rph3aP47708 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rph3aP47708 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rph3aP47708 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rph3aP47708 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rph3aP47708 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rph3aP47708 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rph3aP47708 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rph3aP47708 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rph3aP47708 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.21■□□□□ 0.35
Rph3aP47708 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rph3aP47708 Gm12441-201ENSMUST00000121806 588 ntBASIC17.21■□□□□ 0.35
Rph3aP47708 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rph3aP47708 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Rph3aP47708 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Rph3aP47708 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rph3aP47708 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rph3aP47708 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rph3aP47708 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rph3aP47708 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rph3aP47708 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Rph3aP47708 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rph3aP47708 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Rph3aP47708 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Rph3aP47708 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rph3aP47708 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rph3aP47708 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rph3aP47708 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rph3aP47708 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rph3aP47708 Tgds-204ENSMUST00000228543 1594 ntBASIC17.2■□□□□ 0.34
Rph3aP47708 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rph3aP47708 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rph3aP47708 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rph3aP47708 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Rph3aP47708 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Rph3aP47708 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rph3aP47708 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.2■□□□□ 0.34
Rph3aP47708 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rph3aP47708 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rph3aP47708 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rph3aP47708 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rph3aP47708 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rph3aP47708 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rph3aP47708 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rph3aP47708 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rph3aP47708 Flg-201ENSMUST00000050758 1488 ntBASIC17.19■□□□□ 0.34
Rph3aP47708 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rph3aP47708 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rph3aP47708 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rph3aP47708 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rph3aP47708 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rph3aP47708 Gm29257-201ENSMUST00000186115 639 ntBASIC17.19■□□□□ 0.34
Rph3aP47708 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.19■□□□□ 0.34
Rph3aP47708 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.19■□□□□ 0.34
Rph3aP47708 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rph3aP47708 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rph3aP47708 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rph3aP47708 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rph3aP47708 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rph3aP47708 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Rph3aP47708 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rph3aP47708 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rph3aP47708 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rph3aP47708 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rph3aP47708 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rph3aP47708 Gm2559-201ENSMUST00000201323 363 ntBASIC17.18■□□□□ 0.34
Rph3aP47708 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rph3aP47708 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Rph3aP47708 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rph3aP47708 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rph3aP47708 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Rph3aP47708 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.17■□□□□ 0.34
Rph3aP47708 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Rph3aP47708 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.17■□□□□ 0.34
Rph3aP47708 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.17■□□□□ 0.34
Rph3aP47708 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rph3aP47708 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.17■□□□□ 0.34
Rph3aP47708 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rph3aP47708 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rph3aP47708 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rph3aP47708 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rph3aP47708 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rph3aP47708 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Rph3aP47708 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rph3aP47708 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rph3aP47708 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rph3aP47708 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.16■□□□□ 0.34
Rph3aP47708 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms