Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.91■□□□□ 0.3
Nkx2-6P43688 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.91■□□□□ 0.3
Nkx2-6P43688 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx2-6P43688 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Nkx2-6P43688 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Nkx2-6P43688 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-6P43688 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-6P43688 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.9■□□□□ 0.3
Nkx2-6P43688 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.9■□□□□ 0.3
Nkx2-6P43688 Timm23-208ENSMUST00000226683 750 ntBASIC16.9■□□□□ 0.3
Nkx2-6P43688 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-6P43688 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-6P43688 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-6P43688 Gm9987-201ENSMUST00000069768 567 ntBASIC16.9■□□□□ 0.3
Nkx2-6P43688 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Nkx2-6P43688 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.9■□□□□ 0.3
Nkx2-6P43688 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-6P43688 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Nkx2-6P43688 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.9■□□□□ 0.3
Nkx2-6P43688 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Nkx2-6P43688 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.89■□□□□ 0.29
Nkx2-6P43688 Gm43799-201ENSMUST00000201845 579 ntBASIC16.89■□□□□ 0.29
Nkx2-6P43688 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.89■□□□□ 0.29
Nkx2-6P43688 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.89■□□□□ 0.29
Nkx2-6P43688 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.89■□□□□ 0.29
Nkx2-6P43688 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-6P43688 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-6P43688 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-6P43688 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-6P43688 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-6P43688 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-6P43688 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Nkx2-6P43688 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.88■□□□□ 0.29
Nkx2-6P43688 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-6P43688 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-6P43688 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-6P43688 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-6P43688 Gm12382-201ENSMUST00000122005 922 ntBASIC16.88■□□□□ 0.29
Nkx2-6P43688 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.88■□□□□ 0.29
Nkx2-6P43688 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-6P43688 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-6P43688 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.88■□□□□ 0.29
Nkx2-6P43688 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-6P43688 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-6P43688 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-6P43688 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-6P43688 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-6P43688 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Nkx2-6P43688 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Nkx2-6P43688 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Nkx2-6P43688 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-6P43688 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-6P43688 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Nkx2-6P43688 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-6P43688 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-6P43688 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.87■□□□□ 0.29
Nkx2-6P43688 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-6P43688 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Nkx2-6P43688 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-6P43688 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.87■□□□□ 0.29
Nkx2-6P43688 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Nkx2-6P43688 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.87■□□□□ 0.29
Nkx2-6P43688 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-6P43688 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-6P43688 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-6P43688 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.87■□□□□ 0.29
Nkx2-6P43688 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-6P43688 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Nkx2-6P43688 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-6P43688 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-6P43688 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-6P43688 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-6P43688 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Nkx2-6P43688 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-6P43688 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-6P43688 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-6P43688 Gm10231-201ENSMUST00000181584 441 ntBASIC16.86■□□□□ 0.29
Nkx2-6P43688 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-6P43688 Gm3375-201ENSMUST00000203929 796 ntBASIC16.86■□□□□ 0.29
Nkx2-6P43688 Gm10175-202ENSMUST00000208752 441 ntBASIC16.86■□□□□ 0.29
Nkx2-6P43688 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-6P43688 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-6P43688 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-6P43688 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-6P43688 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-6P43688 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-6P43688 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-6P43688 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-6P43688 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.86■□□□□ 0.29
Nkx2-6P43688 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.86■□□□□ 0.29
Nkx2-6P43688 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-6P43688 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.86■□□□□ 0.29
Nkx2-6P43688 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.86■□□□□ 0.29
Nkx2-6P43688 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Nkx2-6P43688 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-6P43688 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-6P43688 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-6P43688 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-6P43688 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.85■□□□□ 0.29
Nkx2-6P43688 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms