Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h1dP43277 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h1dP43277 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h1dP43277 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h1dP43277 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h1dP43277 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h1dP43277 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h1dP43277 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h1dP43277 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.16■□□□□ 0.02
Hist1h1dP43277 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h1dP43277 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Hist1h1dP43277 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Hist1h1dP43277 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h1dP43277 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h1dP43277 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.16■□□□□ 0.02
Hist1h1dP43277 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h1dP43277 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h1dP43277 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h1dP43277 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.16■□□□□ 0.02
Hist1h1dP43277 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h1dP43277 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h1dP43277 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.16■□□□□ 0.02
Hist1h1dP43277 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h1dP43277 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h1dP43277 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h1dP43277 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h1dP43277 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.15■□□□□ 0.02
Hist1h1dP43277 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h1dP43277 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h1dP43277 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h1dP43277 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h1dP43277 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h1dP43277 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.15■□□□□ 0.02
Hist1h1dP43277 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Hist1h1dP43277 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.15■□□□□ 0.02
Hist1h1dP43277 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.15■□□□□ 0.02
Hist1h1dP43277 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h1dP43277 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h1dP43277 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.15■□□□□ 0.02
Hist1h1dP43277 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h1dP43277 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h1dP43277 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h1dP43277 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h1dP43277 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h1dP43277 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h1dP43277 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h1dP43277 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
Hist1h1dP43277 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC15.14■□□□□ 0.01
Hist1h1dP43277 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.14■□□□□ 0.01
Hist1h1dP43277 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.14■□□□□ 0.01
Hist1h1dP43277 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h1dP43277 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h1dP43277 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h1dP43277 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h1dP43277 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Hist1h1dP43277 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h1dP43277 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h1dP43277 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h1dP43277 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h1dP43277 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h1dP43277 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h1dP43277 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h1dP43277 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h1dP43277 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hist1h1dP43277 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hist1h1dP43277 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hist1h1dP43277 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hist1h1dP43277 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Hist1h1dP43277 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Hist1h1dP43277 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hist1h1dP43277 Gm13234-201ENSMUST00000120010 747 ntBASIC15.13■□□□□ 0.01
Hist1h1dP43277 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hist1h1dP43277 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Hist1h1dP43277 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hist1h1dP43277 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hist1h1dP43277 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.13■□□□□ 0.01
Hist1h1dP43277 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hist1h1dP43277 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hist1h1dP43277 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hist1h1dP43277 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hist1h1dP43277 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hist1h1dP43277 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hist1h1dP43277 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hist1h1dP43277 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.12■□□□□ 0.01
Hist1h1dP43277 Gm21168-201ENSMUST00000199646 1096 ntBASIC15.12■□□□□ 0.01
Hist1h1dP43277 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.12■□□□□ 0.01
Hist1h1dP43277 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hist1h1dP43277 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hist1h1dP43277 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hist1h1dP43277 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hist1h1dP43277 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hist1h1dP43277 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hist1h1dP43277 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Hist1h1dP43277 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hist1h1dP43277 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Hist1h1dP43277 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hist1h1dP43277 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hist1h1dP43277 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hist1h1dP43277 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.12■□□□□ 0.01
Hist1h1dP43277 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms