Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
LdlrP35951 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LdlrP35951 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.78■□□□□ 0.44
LdlrP35951 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.78■□□□□ 0.44
LdlrP35951 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
LdlrP35951 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LdlrP35951 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LdlrP35951 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LdlrP35951 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LdlrP35951 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LdlrP35951 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LdlrP35951 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
LdlrP35951 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LdlrP35951 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LdlrP35951 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.77■□□□□ 0.44
LdlrP35951 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LdlrP35951 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LdlrP35951 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LdlrP35951 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LdlrP35951 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.77■□□□□ 0.44
LdlrP35951 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LdlrP35951 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
LdlrP35951 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LdlrP35951 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LdlrP35951 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LdlrP35951 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LdlrP35951 Gm12527-201ENSMUST00000117967 564 ntBASIC17.76■□□□□ 0.43
LdlrP35951 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LdlrP35951 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LdlrP35951 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.76■□□□□ 0.43
LdlrP35951 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.76■□□□□ 0.43
LdlrP35951 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LdlrP35951 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.76■□□□□ 0.43
LdlrP35951 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LdlrP35951 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LdlrP35951 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LdlrP35951 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LdlrP35951 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LdlrP35951 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LdlrP35951 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LdlrP35951 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LdlrP35951 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LdlrP35951 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LdlrP35951 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LdlrP35951 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LdlrP35951 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LdlrP35951 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LdlrP35951 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LdlrP35951 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LdlrP35951 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LdlrP35951 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LdlrP35951 Gm13146-201ENSMUST00000118508 780 ntBASIC17.75■□□□□ 0.43
LdlrP35951 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LdlrP35951 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LdlrP35951 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LdlrP35951 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LdlrP35951 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LdlrP35951 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LdlrP35951 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LdlrP35951 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LdlrP35951 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LdlrP35951 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LdlrP35951 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LdlrP35951 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LdlrP35951 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LdlrP35951 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LdlrP35951 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LdlrP35951 Gm8520-201ENSMUST00000186517 868 ntBASIC17.74■□□□□ 0.43
LdlrP35951 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.74■□□□□ 0.43
LdlrP35951 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LdlrP35951 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LdlrP35951 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
LdlrP35951 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LdlrP35951 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
LdlrP35951 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
LdlrP35951 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LdlrP35951 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.74■□□□□ 0.43
LdlrP35951 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
LdlrP35951 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LdlrP35951 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LdlrP35951 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LdlrP35951 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LdlrP35951 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LdlrP35951 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LdlrP35951 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LdlrP35951 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LdlrP35951 Gm10252-201ENSMUST00000209541 832 ntBASIC17.73■□□□□ 0.43
LdlrP35951 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LdlrP35951 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LdlrP35951 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
LdlrP35951 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
LdlrP35951 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LdlrP35951 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
LdlrP35951 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LdlrP35951 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LdlrP35951 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
LdlrP35951 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LdlrP35951 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LdlrP35951 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LdlrP35951 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms