Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox5P35710 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox5P35710 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox5P35710 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Sox5P35710 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox5P35710 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox5P35710 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox5P35710 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sox5P35710 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox5P35710 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Sox5P35710 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
Sox5P35710 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox5P35710 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox5P35710 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox5P35710 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox5P35710 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sox5P35710 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Sox5P35710 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Sox5P35710 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox5P35710 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Sox5P35710 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.51■□□□□ 0.71
Sox5P35710 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox5P35710 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox5P35710 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox5P35710 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Sox5P35710 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.51■□□□□ 0.71
Sox5P35710 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
Sox5P35710 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.51■□□□□ 0.71
Sox5P35710 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sox5P35710 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox5P35710 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox5P35710 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox5P35710 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.51■□□□□ 0.71
Sox5P35710 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox5P35710 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.51■□□□□ 0.71
Sox5P35710 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.51■□□□□ 0.71
Sox5P35710 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox5P35710 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox5P35710 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.5■□□□□ 0.71
Sox5P35710 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.5■□□□□ 0.71
Sox5P35710 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox5P35710 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox5P35710 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.5■□□□□ 0.71
Sox5P35710 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Sox5P35710 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.5■□□□□ 0.71
Sox5P35710 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.5■□□□□ 0.71
Sox5P35710 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.5■□□□□ 0.71
Sox5P35710 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox5P35710 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Sox5P35710 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox5P35710 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox5P35710 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox5P35710 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox5P35710 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox5P35710 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox5P35710 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox5P35710 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox5P35710 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Sox5P35710 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
Sox5P35710 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sox5P35710 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox5P35710 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Sox5P35710 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox5P35710 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox5P35710 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox5P35710 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox5P35710 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.49■□□□□ 0.71
Sox5P35710 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sox5P35710 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox5P35710 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox5P35710 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox5P35710 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.49■□□□□ 0.71
Sox5P35710 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox5P35710 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Sox5P35710 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Sox5P35710 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox5P35710 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.48■□□□□ 0.71
Sox5P35710 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox5P35710 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox5P35710 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.48■□□□□ 0.71
Sox5P35710 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.48■□□□□ 0.71
Sox5P35710 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.48■□□□□ 0.71
Sox5P35710 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Sox5P35710 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox5P35710 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox5P35710 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.47■□□□□ 0.71
Sox5P35710 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Sox5P35710 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Sox5P35710 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox5P35710 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Sox5P35710 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.47■□□□□ 0.71
Sox5P35710 Gm7514-201ENSMUST00000209475 934 ntBASIC19.47■□□□□ 0.71
Sox5P35710 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.47■□□□□ 0.71
Sox5P35710 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox5P35710 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox5P35710 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sox5P35710 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox5P35710 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox5P35710 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox5P35710 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms