Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vcam1P29533 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vcam1P29533 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vcam1P29533 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vcam1P29533 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.65■□□□□ 0.9
Vcam1P29533 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vcam1P29533 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Vcam1P29533 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.65■□□□□ 0.9
Vcam1P29533 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Vcam1P29533 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.65■□□□□ 0.9
Vcam1P29533 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Vcam1P29533 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vcam1P29533 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Vcam1P29533 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.65■□□□□ 0.9
Vcam1P29533 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vcam1P29533 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vcam1P29533 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Vcam1P29533 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Vcam1P29533 Gm10418-201ENSMUST00000100943 576 ntBASIC20.64■□□□□ 0.89
Vcam1P29533 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vcam1P29533 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Vcam1P29533 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.64■□□□□ 0.89
Vcam1P29533 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vcam1P29533 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vcam1P29533 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vcam1P29533 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vcam1P29533 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vcam1P29533 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vcam1P29533 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Vcam1P29533 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vcam1P29533 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vcam1P29533 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vcam1P29533 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vcam1P29533 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vcam1P29533 Gm29791-202ENSMUST00000207888 369 ntBASIC20.63■□□□□ 0.89
Vcam1P29533 Gm18959-201ENSMUST00000208954 655 ntBASIC20.63■□□□□ 0.89
Vcam1P29533 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vcam1P29533 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Vcam1P29533 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vcam1P29533 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vcam1P29533 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vcam1P29533 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vcam1P29533 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vcam1P29533 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vcam1P29533 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vcam1P29533 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.63■□□□□ 0.89
Vcam1P29533 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vcam1P29533 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Vcam1P29533 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vcam1P29533 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vcam1P29533 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vcam1P29533 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vcam1P29533 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vcam1P29533 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vcam1P29533 Gm6659-201ENSMUST00000174752 547 ntBASIC20.62■□□□□ 0.89
Vcam1P29533 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vcam1P29533 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vcam1P29533 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vcam1P29533 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vcam1P29533 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vcam1P29533 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vcam1P29533 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vcam1P29533 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vcam1P29533 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vcam1P29533 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vcam1P29533 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vcam1P29533 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Vcam1P29533 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vcam1P29533 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vcam1P29533 Gm24841-201ENSMUST00000158676 357 ntBASIC20.61■□□□□ 0.89
Vcam1P29533 Gm45058-201ENSMUST00000205810 766 ntBASIC20.61■□□□□ 0.89
Vcam1P29533 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vcam1P29533 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vcam1P29533 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Vcam1P29533 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vcam1P29533 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vcam1P29533 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vcam1P29533 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Vcam1P29533 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vcam1P29533 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vcam1P29533 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Vcam1P29533 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Vcam1P29533 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vcam1P29533 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vcam1P29533 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vcam1P29533 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vcam1P29533 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vcam1P29533 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vcam1P29533 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Vcam1P29533 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Vcam1P29533 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Vcam1P29533 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Vcam1P29533 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.6■□□□□ 0.89
Vcam1P29533 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Vcam1P29533 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vcam1P29533 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vcam1P29533 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.59■□□□□ 0.89
Vcam1P29533 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.59■□□□□ 0.89
Vcam1P29533 Gm18032-201ENSMUST00000222541 538 ntBASIC20.59■□□□□ 0.89
Vcam1P29533 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms