Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pde6aP27664 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pde6aP27664 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pde6aP27664 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Pde6aP27664 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pde6aP27664 Gm8520-201ENSMUST00000186517 868 ntBASIC20.75■□□□□ 0.91
Pde6aP27664 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.75■□□□□ 0.91
Pde6aP27664 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.75■□□□□ 0.91
Pde6aP27664 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pde6aP27664 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pde6aP27664 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pde6aP27664 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.75■□□□□ 0.91
Pde6aP27664 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pde6aP27664 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Pde6aP27664 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pde6aP27664 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pde6aP27664 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pde6aP27664 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pde6aP27664 Gm18025-201ENSMUST00000221733 862 ntBASIC20.74■□□□□ 0.91
Pde6aP27664 Idnk-204ENSMUST00000226010 1898 ntBASIC20.74■□□□□ 0.91
Pde6aP27664 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pde6aP27664 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pde6aP27664 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.74■□□□□ 0.91
Pde6aP27664 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pde6aP27664 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pde6aP27664 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pde6aP27664 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pde6aP27664 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pde6aP27664 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pde6aP27664 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pde6aP27664 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pde6aP27664 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.73■□□□□ 0.91
Pde6aP27664 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pde6aP27664 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pde6aP27664 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pde6aP27664 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pde6aP27664 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.73■□□□□ 0.91
Pde6aP27664 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pde6aP27664 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.73■□□□□ 0.91
Pde6aP27664 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.73■□□□□ 0.91
Pde6aP27664 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Pde6aP27664 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pde6aP27664 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pde6aP27664 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.72■□□□□ 0.91
Pde6aP27664 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pde6aP27664 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pde6aP27664 Gm42545-201ENSMUST00000202755 922 ntBASIC20.72■□□□□ 0.91
Pde6aP27664 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pde6aP27664 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pde6aP27664 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pde6aP27664 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pde6aP27664 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pde6aP27664 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pde6aP27664 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pde6aP27664 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pde6aP27664 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pde6aP27664 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pde6aP27664 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pde6aP27664 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
Pde6aP27664 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
Pde6aP27664 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pde6aP27664 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pde6aP27664 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Pde6aP27664 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pde6aP27664 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pde6aP27664 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Pde6aP27664 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pde6aP27664 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pde6aP27664 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pde6aP27664 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Pde6aP27664 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pde6aP27664 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pde6aP27664 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pde6aP27664 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pde6aP27664 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pde6aP27664 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pde6aP27664 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pde6aP27664 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Pde6aP27664 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pde6aP27664 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pde6aP27664 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pde6aP27664 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pde6aP27664 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pde6aP27664 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pde6aP27664 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Pde6aP27664 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Pde6aP27664 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pde6aP27664 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pde6aP27664 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pde6aP27664 Gm22240-201ENSMUST00000175225 82 ntBASIC20.68■□□□□ 0.9
Pde6aP27664 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.68■□□□□ 0.9
Pde6aP27664 Gm29791-202ENSMUST00000207888 369 ntBASIC20.68■□□□□ 0.9
Pde6aP27664 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.68■□□□□ 0.9
Pde6aP27664 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.68■□□□□ 0.9
Pde6aP27664 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pde6aP27664 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pde6aP27664 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.68■□□□□ 0.9
Pde6aP27664 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.68■□□□□ 0.9
Pde6aP27664 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pde6aP27664 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms