Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm5417-201ENSMUST00000079706 384 ntBASIC18.38■□□□□ 0.53
Nfkb1P25799 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nfkb1P25799 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.38■□□□□ 0.53
Nfkb1P25799 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nfkb1P25799 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nfkb1P25799 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nfkb1P25799 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nfkb1P25799 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nfkb1P25799 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.37■□□□□ 0.53
Nfkb1P25799 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.37■□□□□ 0.53
Nfkb1P25799 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.37■□□□□ 0.53
Nfkb1P25799 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Nfkb1P25799 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.37■□□□□ 0.53
Nfkb1P25799 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nfkb1P25799 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Nfkb1P25799 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.37■□□□□ 0.53
Nfkb1P25799 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nfkb1P25799 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nfkb1P25799 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.37■□□□□ 0.53
Nfkb1P25799 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nfkb1P25799 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nfkb1P25799 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nfkb1P25799 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nfkb1P25799 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nfkb1P25799 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Nfkb1P25799 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nfkb1P25799 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.36■□□□□ 0.53
Nfkb1P25799 Gm13836-201ENSMUST00000121159 501 ntBASIC18.36■□□□□ 0.53
Nfkb1P25799 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nfkb1P25799 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nfkb1P25799 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nfkb1P25799 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nfkb1P25799 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.36■□□□□ 0.53
Nfkb1P25799 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.36■□□□□ 0.53
Nfkb1P25799 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.36■□□□□ 0.53
Nfkb1P25799 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nfkb1P25799 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Nfkb1P25799 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nfkb1P25799 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nfkb1P25799 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Nfkb1P25799 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nfkb1P25799 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nfkb1P25799 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nfkb1P25799 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nfkb1P25799 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nfkb1P25799 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nfkb1P25799 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nfkb1P25799 Mir2861-201ENSMUST00000175539 82 ntBASIC18.35■□□□□ 0.53
Nfkb1P25799 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.35■□□□□ 0.53
Nfkb1P25799 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Nfkb1P25799 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.35■□□□□ 0.53
Nfkb1P25799 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Nfkb1P25799 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.35■□□□□ 0.53
Nfkb1P25799 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nfkb1P25799 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nfkb1P25799 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nfkb1P25799 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nfkb1P25799 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nfkb1P25799 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Nfkb1P25799 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nfkb1P25799 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.34■□□□□ 0.53
Nfkb1P25799 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.34■□□□□ 0.53
Nfkb1P25799 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nfkb1P25799 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.34■□□□□ 0.53
Nfkb1P25799 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nfkb1P25799 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nfkb1P25799 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nfkb1P25799 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nfkb1P25799 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nfkb1P25799 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nfkb1P25799 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Nfkb1P25799 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nfkb1P25799 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nfkb1P25799 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nfkb1P25799 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nfkb1P25799 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nfkb1P25799 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.33■□□□□ 0.52
Nfkb1P25799 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nfkb1P25799 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nfkb1P25799 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nfkb1P25799 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Nfkb1P25799 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nfkb1P25799 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nfkb1P25799 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nfkb1P25799 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Nfkb1P25799 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.32■□□□□ 0.52
Nfkb1P25799 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nfkb1P25799 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.32■□□□□ 0.52
Nfkb1P25799 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nfkb1P25799 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nfkb1P25799 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.32■□□□□ 0.52
Nfkb1P25799 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nfkb1P25799 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.31■□□□□ 0.52
Nfkb1P25799 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Nfkb1P25799 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Nfkb1P25799 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Nfkb1P25799 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nfkb1P25799 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Nfkb1P25799 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Nfkb1P25799 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms