Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pde6bP23440 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pde6bP23440 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.44■□□□□ 0.7
Pde6bP23440 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.44■□□□□ 0.7
Pde6bP23440 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.44■□□□□ 0.7
Pde6bP23440 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pde6bP23440 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Pde6bP23440 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pde6bP23440 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.44■□□□□ 0.7
Pde6bP23440 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pde6bP23440 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pde6bP23440 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pde6bP23440 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pde6bP23440 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.44■□□□□ 0.7
Pde6bP23440 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pde6bP23440 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pde6bP23440 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pde6bP23440 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pde6bP23440 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pde6bP23440 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pde6bP23440 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.44■□□□□ 0.7
Pde6bP23440 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pde6bP23440 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pde6bP23440 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Pde6bP23440 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6bP23440 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.43■□□□□ 0.7
Pde6bP23440 Gm12382-201ENSMUST00000122005 922 ntBASIC19.43■□□□□ 0.7
Pde6bP23440 Gm30025-201ENSMUST00000218555 728 ntBASIC19.43■□□□□ 0.7
Pde6bP23440 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6bP23440 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6bP23440 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6bP23440 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Pde6bP23440 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6bP23440 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6bP23440 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6bP23440 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6bP23440 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6bP23440 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6bP23440 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Pde6bP23440 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6bP23440 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6bP23440 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.43■□□□□ 0.7
Pde6bP23440 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6bP23440 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.42■□□□□ 0.7
Pde6bP23440 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6bP23440 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6bP23440 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Pde6bP23440 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6bP23440 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6bP23440 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6bP23440 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6bP23440 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.42■□□□□ 0.7
Pde6bP23440 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6bP23440 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.42■□□□□ 0.7
Pde6bP23440 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.42■□□□□ 0.7
Pde6bP23440 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6bP23440 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6bP23440 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6bP23440 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6bP23440 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Pde6bP23440 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.42■□□□□ 0.7
Pde6bP23440 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6bP23440 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6bP23440 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.41■□□□□ 0.7
Pde6bP23440 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6bP23440 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.41■□□□□ 0.7
Pde6bP23440 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6bP23440 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.41■□□□□ 0.7
Pde6bP23440 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6bP23440 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6bP23440 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Pde6bP23440 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6bP23440 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.41■□□□□ 0.7
Pde6bP23440 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6bP23440 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6bP23440 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Pde6bP23440 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6bP23440 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6bP23440 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Pde6bP23440 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6bP23440 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6bP23440 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pde6bP23440 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pde6bP23440 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Pde6bP23440 Timm23-208ENSMUST00000226683 750 ntBASIC19.4■□□□□ 0.7
Pde6bP23440 Odf3b-204ENSMUST00000227834 930 ntBASIC19.4■□□□□ 0.7
Pde6bP23440 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Pde6bP23440 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Pde6bP23440 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pde6bP23440 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pde6bP23440 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pde6bP23440 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.4■□□□□ 0.7
Pde6bP23440 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pde6bP23440 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pde6bP23440 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.4■□□□□ 0.7
Pde6bP23440 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pde6bP23440 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Pde6bP23440 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Pde6bP23440 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Pde6bP23440 Gm10231-201ENSMUST00000181584 441 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms