Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cd44P15379 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd44P15379 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd44P15379 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd44P15379 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cd44P15379 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.78■□□□□ 0.6
Cd44P15379 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cd44P15379 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd44P15379 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd44P15379 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd44P15379 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cd44P15379 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd44P15379 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd44P15379 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd44P15379 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.78■□□□□ 0.6
Cd44P15379 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cd44P15379 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd44P15379 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cd44P15379 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd44P15379 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cd44P15379 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
Cd44P15379 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.77■□□□□ 0.6
Cd44P15379 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Cd44P15379 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cd44P15379 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Cd44P15379 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cd44P15379 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.77■□□□□ 0.6
Cd44P15379 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cd44P15379 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd44P15379 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd44P15379 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Cd44P15379 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd44P15379 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cd44P15379 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd44P15379 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cd44P15379 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.76■□□□□ 0.59
Cd44P15379 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd44P15379 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cd44P15379 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd44P15379 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd44P15379 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd44P15379 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd44P15379 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cd44P15379 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.76■□□□□ 0.59
Cd44P15379 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.76■□□□□ 0.59
Cd44P15379 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd44P15379 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd44P15379 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Cd44P15379 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd44P15379 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd44P15379 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd44P15379 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.75■□□□□ 0.59
Cd44P15379 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.75■□□□□ 0.59
Cd44P15379 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.75■□□□□ 0.59
Cd44P15379 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.75■□□□□ 0.59
Cd44P15379 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd44P15379 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd44P15379 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd44P15379 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd44P15379 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.75■□□□□ 0.59
Cd44P15379 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cd44P15379 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd44P15379 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd44P15379 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd44P15379 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd44P15379 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cd44P15379 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd44P15379 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd44P15379 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.74■□□□□ 0.59
Cd44P15379 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd44P15379 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd44P15379 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd44P15379 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cd44P15379 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd44P15379 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cd44P15379 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.74■□□□□ 0.59
Cd44P15379 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Cd44P15379 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd44P15379 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd44P15379 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.73■□□□□ 0.59
Cd44P15379 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd44P15379 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cd44P15379 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd44P15379 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.73■□□□□ 0.59
Cd44P15379 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd44P15379 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd44P15379 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.73■□□□□ 0.59
Cd44P15379 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cd44P15379 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd44P15379 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd44P15379 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cd44P15379 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.73■□□□□ 0.59
Cd44P15379 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd44P15379 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.73■□□□□ 0.59
Cd44P15379 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd44P15379 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd44P15379 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cd44P15379 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cd44P15379 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cd44P15379 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms