Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Gm15820-201ENSMUST00000201566 728 ntBASIC13.92□□□□□ -0.18
Ccl1P10146 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl1P10146 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl1P10146 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl1P10146 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ccl1P10146 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl1P10146 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl1P10146 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl1P10146 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl1P10146 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl1P10146 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl1P10146 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl1P10146 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl1P10146 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl1P10146 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl1P10146 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl1P10146 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl1P10146 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl1P10146 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl1P10146 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl1P10146 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl1P10146 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ccl1P10146 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Ccl1P10146 Gm22238-201ENSMUST00000175222 88 ntBASIC13.91□□□□□ -0.18
Ccl1P10146 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl1P10146 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl1P10146 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl1P10146 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl1P10146 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ccl1P10146 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ccl1P10146 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ccl1P10146 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl1P10146 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.9□□□□□ -0.18
Ccl1P10146 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl1P10146 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl1P10146 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl1P10146 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl1P10146 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl1P10146 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl1P10146 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl1P10146 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.9□□□□□ -0.18
Ccl1P10146 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl1P10146 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl1P10146 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl1P10146 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl1P10146 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl1P10146 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.9□□□□□ -0.18
Ccl1P10146 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl1P10146 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl1P10146 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl1P10146 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl1P10146 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ccl1P10146 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl1P10146 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl1P10146 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccl1P10146 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl1P10146 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl1P10146 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl1P10146 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl1P10146 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl1P10146 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccl1P10146 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl1P10146 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl1P10146 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC13.89□□□□□ -0.19
Ccl1P10146 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.89□□□□□ -0.19
Ccl1P10146 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl1P10146 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC13.89□□□□□ -0.19
Ccl1P10146 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ccl1P10146 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl1P10146 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ccl1P10146 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl1P10146 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.88□□□□□ -0.19
Ccl1P10146 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl1P10146 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl1P10146 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl1P10146 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl1P10146 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl1P10146 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ccl1P10146 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl1P10146 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC13.88□□□□□ -0.19
Ccl1P10146 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.88□□□□□ -0.19
Ccl1P10146 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl1P10146 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl1P10146 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl1P10146 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl1P10146 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.88□□□□□ -0.19
Ccl1P10146 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl1P10146 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccl1P10146 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl1P10146 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl1P10146 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.87□□□□□ -0.19
Ccl1P10146 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ccl1P10146 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccl1P10146 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl1P10146 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl1P10146 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccl1P10146 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ccl1P10146 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl1P10146 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ccl1P10146 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms