Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim1P0C8K7 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim1P0C8K7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC12.35□□□□□ -0.43
Smim1P0C8K7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC12.35□□□□□ -0.43
Smim1P0C8K7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smim1P0C8K7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim1P0C8K7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim1P0C8K7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim1P0C8K7 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim1P0C8K7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim1P0C8K7 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Smim1P0C8K7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim1P0C8K7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim1P0C8K7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
Smim1P0C8K7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smim1P0C8K7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim1P0C8K7 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim1P0C8K7 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim1P0C8K7 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.34□□□□□ -0.43
Smim1P0C8K7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Smim1P0C8K7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim1P0C8K7 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim1P0C8K7 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim1P0C8K7 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim1P0C8K7 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Smim1P0C8K7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim1P0C8K7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim1P0C8K7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim1P0C8K7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim1P0C8K7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim1P0C8K7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smim1P0C8K7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim1P0C8K7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim1P0C8K7 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Smim1P0C8K7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Smim1P0C8K7 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smim1P0C8K7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.34□□□□□ -0.43
Smim1P0C8K7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Smim1P0C8K7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim1P0C8K7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Smim1P0C8K7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Smim1P0C8K7 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smim1P0C8K7 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Smim1P0C8K7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Smim1P0C8K7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Smim1P0C8K7 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Smim1P0C8K7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim1P0C8K7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim1P0C8K7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.33□□□□□ -0.44
Smim1P0C8K7 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim1P0C8K7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim1P0C8K7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim1P0C8K7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
Smim1P0C8K7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Smim1P0C8K7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim1P0C8K7 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim1P0C8K7 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Smim1P0C8K7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Smim1P0C8K7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Smim1P0C8K7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Smim1P0C8K7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smim1P0C8K7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim1P0C8K7 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim1P0C8K7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Smim1P0C8K7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim1P0C8K7 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim1P0C8K7 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smim1P0C8K7 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Smim1P0C8K7 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Smim1P0C8K7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim1P0C8K7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim1P0C8K7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.33□□□□□ -0.44
Smim1P0C8K7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim1P0C8K7 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.33□□□□□ -0.44
Smim1P0C8K7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim1P0C8K7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim1P0C8K7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim1P0C8K7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smim1P0C8K7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim1P0C8K7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Smim1P0C8K7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim1P0C8K7 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim1P0C8K7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Smim1P0C8K7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim1P0C8K7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smim1P0C8K7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim1P0C8K7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim1P0C8K7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim1P0C8K7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smim1P0C8K7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smim1P0C8K7 Gm37805-201ENSMUST00000192612 1094 ntBASIC12.32□□□□□ -0.44
Smim1P0C8K7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Smim1P0C8K7 Gm9870-201ENSMUST00000063874 645 ntBASIC12.32□□□□□ -0.44
Smim1P0C8K7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Smim1P0C8K7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Smim1P0C8K7 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim1P0C8K7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim1P0C8K7 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smim1P0C8K7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim1P0C8K7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms