Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sod1P08228 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Sod1P08228 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Sod1P08228 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sod1P08228 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
Sod1P08228 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sod1P08228 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sod1P08228 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sod1P08228 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sod1P08228 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sod1P08228 Gm22697-201ENSMUST00000175194 63 ntBASIC16.87■□□□□ 0.29
Sod1P08228 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sod1P08228 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sod1P08228 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sod1P08228 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sod1P08228 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sod1P08228 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sod1P08228 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Sod1P08228 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.86■□□□□ 0.29
Sod1P08228 Gm33142-201ENSMUST00000193913 867 ntBASIC16.86■□□□□ 0.29
Sod1P08228 Gm29791-202ENSMUST00000207888 369 ntBASIC16.86■□□□□ 0.29
Sod1P08228 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sod1P08228 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sod1P08228 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sod1P08228 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sod1P08228 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sod1P08228 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sod1P08228 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sod1P08228 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
Sod1P08228 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sod1P08228 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Sod1P08228 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sod1P08228 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sod1P08228 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sod1P08228 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Sod1P08228 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sod1P08228 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Sod1P08228 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sod1P08228 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sod1P08228 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Sod1P08228 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.85■□□□□ 0.29
Sod1P08228 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sod1P08228 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sod1P08228 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.85■□□□□ 0.29
Sod1P08228 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Sod1P08228 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Sod1P08228 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Sod1P08228 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.84■□□□□ 0.29
Sod1P08228 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sod1P08228 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Sod1P08228 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sod1P08228 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sod1P08228 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Sod1P08228 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Sod1P08228 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sod1P08228 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.84■□□□□ 0.29
Sod1P08228 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Sod1P08228 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sod1P08228 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Sod1P08228 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sod1P08228 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Sod1P08228 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sod1P08228 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Sod1P08228 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.84■□□□□ 0.29
Sod1P08228 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.84■□□□□ 0.29
Sod1P08228 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Sod1P08228 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sod1P08228 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sod1P08228 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sod1P08228 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sod1P08228 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sod1P08228 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sod1P08228 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
Sod1P08228 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sod1P08228 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sod1P08228 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sod1P08228 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sod1P08228 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.83■□□□□ 0.28
Sod1P08228 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Sod1P08228 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.83■□□□□ 0.28
Sod1P08228 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sod1P08228 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sod1P08228 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sod1P08228 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Sod1P08228 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sod1P08228 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sod1P08228 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sod1P08228 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sod1P08228 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sod1P08228 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sod1P08228 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.82■□□□□ 0.28
Sod1P08228 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Sod1P08228 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.82■□□□□ 0.28
Sod1P08228 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.82■□□□□ 0.28
Sod1P08228 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.82■□□□□ 0.28
Sod1P08228 Gm7370-201ENSMUST00000219471 767 ntBASIC16.82■□□□□ 0.28
Sod1P08228 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Sod1P08228 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sod1P08228 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Sod1P08228 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms