Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ApoeP08226 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
ApoeP08226 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ApoeP08226 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.94■□□□□ 0.3
ApoeP08226 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ApoeP08226 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ApoeP08226 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ApoeP08226 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ApoeP08226 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ApoeP08226 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ApoeP08226 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ApoeP08226 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ApoeP08226 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ApoeP08226 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ApoeP08226 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
ApoeP08226 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ApoeP08226 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.93■□□□□ 0.3
ApoeP08226 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ApoeP08226 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
ApoeP08226 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
ApoeP08226 Gm40848-201ENSMUST00000221998 324 ntBASIC16.93■□□□□ 0.3
ApoeP08226 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
ApoeP08226 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ApoeP08226 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ApoeP08226 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ApoeP08226 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ApoeP08226 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.93■□□□□ 0.3
ApoeP08226 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ApoeP08226 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ApoeP08226 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ApoeP08226 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ApoeP08226 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ApoeP08226 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ApoeP08226 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.92■□□□□ 0.3
ApoeP08226 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.92■□□□□ 0.3
ApoeP08226 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.92■□□□□ 0.3
ApoeP08226 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ApoeP08226 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ApoeP08226 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ApoeP08226 Gm26833-201ENSMUST00000180899 440 ntBASIC16.92■□□□□ 0.3
ApoeP08226 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ApoeP08226 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ApoeP08226 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.92■□□□□ 0.3
ApoeP08226 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ApoeP08226 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
ApoeP08226 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ApoeP08226 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ApoeP08226 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ApoeP08226 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ApoeP08226 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ApoeP08226 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ApoeP08226 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ApoeP08226 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ApoeP08226 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ApoeP08226 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.91■□□□□ 0.3
ApoeP08226 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ApoeP08226 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.91■□□□□ 0.3
ApoeP08226 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ApoeP08226 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ApoeP08226 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ApoeP08226 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ApoeP08226 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.91■□□□□ 0.3
ApoeP08226 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.91■□□□□ 0.3
ApoeP08226 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ApoeP08226 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ApoeP08226 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ApoeP08226 Gm21956-201ENSMUST00000179946 522 ntBASIC16.91■□□□□ 0.3
ApoeP08226 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.91■□□□□ 0.3
ApoeP08226 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ApoeP08226 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ApoeP08226 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ApoeP08226 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.91■□□□□ 0.3
ApoeP08226 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
ApoeP08226 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ApoeP08226 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ApoeP08226 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ApoeP08226 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ApoeP08226 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ApoeP08226 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ApoeP08226 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ApoeP08226 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.9■□□□□ 0.3
ApoeP08226 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ApoeP08226 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ApoeP08226 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.9■□□□□ 0.3
ApoeP08226 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ApoeP08226 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ApoeP08226 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ApoeP08226 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ApoeP08226 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ApoeP08226 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ApoeP08226 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ApoeP08226 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
ApoeP08226 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ApoeP08226 Gm13241-201ENSMUST00000094493 780 ntBASIC16.9■□□□□ 0.3
ApoeP08226 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ApoeP08226 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ApoeP08226 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.9■□□□□ 0.3
ApoeP08226 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ApoeP08226 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ApoeP08226 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms