Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.58■□□□□ 0.41
Hoxa4P06798 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxa4P06798 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxa4P06798 Gm6576-201ENSMUST00000169678 883 ntBASIC17.58■□□□□ 0.4
Hoxa4P06798 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.58■□□□□ 0.4
Hoxa4P06798 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Hoxa4P06798 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Hoxa4P06798 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxa4P06798 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxa4P06798 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxa4P06798 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxa4P06798 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxa4P06798 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.57■□□□□ 0.4
Hoxa4P06798 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxa4P06798 Idnk-204ENSMUST00000226010 1898 ntBASIC17.57■□□□□ 0.4
Hoxa4P06798 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.57■□□□□ 0.4
Hoxa4P06798 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Hoxa4P06798 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxa4P06798 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.57■□□□□ 0.4
Hoxa4P06798 Gm12382-201ENSMUST00000122005 922 ntBASIC17.57■□□□□ 0.4
Hoxa4P06798 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxa4P06798 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.57■□□□□ 0.4
Hoxa4P06798 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxa4P06798 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxa4P06798 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Hoxa4P06798 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.57■□□□□ 0.4
Hoxa4P06798 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxa4P06798 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxa4P06798 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxa4P06798 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.56■□□□□ 0.4
Hoxa4P06798 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa4P06798 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa4P06798 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa4P06798 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa4P06798 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa4P06798 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Hoxa4P06798 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.56■□□□□ 0.4
Hoxa4P06798 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa4P06798 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa4P06798 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa4P06798 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.56■□□□□ 0.4
Hoxa4P06798 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa4P06798 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa4P06798 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa4P06798 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa4P06798 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa4P06798 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa4P06798 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa4P06798 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa4P06798 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa4P06798 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa4P06798 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa4P06798 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa4P06798 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa4P06798 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Hoxa4P06798 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa4P06798 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa4P06798 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Hoxa4P06798 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa4P06798 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa4P06798 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa4P06798 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa4P06798 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa4P06798 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa4P06798 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.55■□□□□ 0.4
Hoxa4P06798 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa4P06798 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa4P06798 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa4P06798 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa4P06798 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa4P06798 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa4P06798 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa4P06798 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa4P06798 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa4P06798 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa4P06798 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Hoxa4P06798 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa4P06798 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.54■□□□□ 0.4
Hoxa4P06798 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa4P06798 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Hoxa4P06798 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa4P06798 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Hoxa4P06798 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa4P06798 Gm13401-201ENSMUST00000117074 291 ntBASIC17.54■□□□□ 0.4
Hoxa4P06798 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.54■□□□□ 0.4
Hoxa4P06798 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa4P06798 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.54■□□□□ 0.4
Hoxa4P06798 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.54■□□□□ 0.4
Hoxa4P06798 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa4P06798 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.54■□□□□ 0.4
Hoxa4P06798 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa4P06798 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa4P06798 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa4P06798 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa4P06798 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxa4P06798 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxa4P06798 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxa4P06798 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.53■□□□□ 0.4
Hoxa4P06798 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Hoxa4P06798 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms