Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P06328 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06328 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06328 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P06328 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P06328 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06328 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P06328 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06328 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06328 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
P06328 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06328 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06328 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06328 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06328 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06328 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.09□□□□□ -0.31
P06328 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
P06328 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P06328 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
P06328 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06328 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06328 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.09□□□□□ -0.31
P06328 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06328 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06328 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06328 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06328 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06328 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06328 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
P06328 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
P06328 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
P06328 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06328 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06328 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
P06328 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
P06328 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06328 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06328 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06328 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06328 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC13.08□□□□□ -0.32
P06328 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P06328 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06328 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06328 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
P06328 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06328 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06328 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06328 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06328 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06328 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06328 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06328 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06328 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06328 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P06328 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06328 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06328 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
P06328 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
P06328 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.07□□□□□ -0.32
P06328 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06328 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P06328 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P06328 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
P06328 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06328 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
P06328 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P06328 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.07□□□□□ -0.32
P06328 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P06328 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.07□□□□□ -0.32
P06328 Gm7514-201ENSMUST00000209475 934 ntBASIC13.07□□□□□ -0.32
P06328 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P06328 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06328 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06328 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06328 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P06328 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06328 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06328 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06328 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06328 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06328 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P06328 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06328 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06328 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06328 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P06328 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
P06328 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06328 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06328 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06328 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
P06328 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06328 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
P06328 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
P06328 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06328 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
P06328 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06328 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06328 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06328 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06328 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms