Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd74P04441 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cd74P04441 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd74P04441 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
Cd74P04441 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cd74P04441 Gm43859-201ENSMUST00000200075 1412 ntBASIC15□□□□□ -0.01
Cd74P04441 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cd74P04441 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cd74P04441 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cd74P04441 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cd74P04441 Gm15635-204ENSMUST00000208024 2539 ntBASIC15□□□□□ -0.01
Cd74P04441 Gm15743-202ENSMUST00000182690 1901 ntBASIC15□□□□□ -0.01
Cd74P04441 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cd74P04441 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Cd74P04441 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15□□□□□ -0.01
Cd74P04441 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cd74P04441 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cd74P04441 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Cd74P04441 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15□□□□□ -0.01
Cd74P04441 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cd74P04441 Gm10653-202ENSMUST00000139570 835 ntBASIC15□□□□□ -0.01
Cd74P04441 Gm22240-201ENSMUST00000175225 82 ntBASIC15□□□□□ -0.01
Cd74P04441 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cd74P04441 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cd74P04441 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cd74P04441 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cd74P04441 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cd74P04441 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cd74P04441 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cd74P04441 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cd74P04441 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cd74P04441 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.99□□□□□ -0.01
Cd74P04441 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd74P04441 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.99□□□□□ -0.01
Cd74P04441 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cd74P04441 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd74P04441 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.99□□□□□ -0.01
Cd74P04441 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd74P04441 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.99□□□□□ -0.01
Cd74P04441 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd74P04441 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd74P04441 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd74P04441 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd74P04441 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.99□□□□□ -0.01
Cd74P04441 Rab3c-203ENSMUST00000224180 967 ntBASIC14.99□□□□□ -0.01
Cd74P04441 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.99□□□□□ -0.01
Cd74P04441 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd74P04441 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd74P04441 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cd74P04441 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd74P04441 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd74P04441 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd74P04441 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cd74P04441 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Cd74P04441 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cd74P04441 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd74P04441 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd74P04441 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cd74P04441 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.98□□□□□ -0.01
Cd74P04441 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd74P04441 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.98□□□□□ -0.01
Cd74P04441 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd74P04441 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd74P04441 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd74P04441 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cd74P04441 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd74P04441 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd74P04441 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.98□□□□□ -0.01
Cd74P04441 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd74P04441 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.98□□□□□ -0.01
Cd74P04441 Gm20049-201ENSMUST00000219950 730 ntBASIC14.98□□□□□ -0.01
Cd74P04441 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd74P04441 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd74P04441 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Cd74P04441 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd74P04441 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd74P04441 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cd74P04441 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cd74P04441 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cd74P04441 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd74P04441 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Cd74P04441 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd74P04441 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd74P04441 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd74P04441 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Cd74P04441 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd74P04441 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Cd74P04441 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.97□□□□□ -0.01
Cd74P04441 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd74P04441 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd74P04441 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Cd74P04441 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Cd74P04441 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cd74P04441 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd74P04441 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cd74P04441 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.97□□□□□ -0.01
Cd74P04441 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd74P04441 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cd74P04441 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd74P04441 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms