Protein–RNA interactions for Protein: P02340

Tp53, Cellular tumor antigen p53, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tp53P02340 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tp53P02340 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tp53P02340 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tp53P02340 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tp53P02340 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tp53P02340 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tp53P02340 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tp53P02340 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tp53P02340 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tp53P02340 Gm20760-201ENSMUST00000179197 648 ntBASIC19.33■□□□□ 0.68
Tp53P02340 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tp53P02340 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Tp53P02340 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tp53P02340 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tp53P02340 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tp53P02340 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tp53P02340 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.32■□□□□ 0.68
Tp53P02340 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tp53P02340 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tp53P02340 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tp53P02340 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tp53P02340 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tp53P02340 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Tp53P02340 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.32■□□□□ 0.68
Tp53P02340 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tp53P02340 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Tp53P02340 Gm27275-201ENSMUST00000184318 272 ntBASIC19.32■□□□□ 0.68
Tp53P02340 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.32■□□□□ 0.68
Tp53P02340 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tp53P02340 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tp53P02340 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Tp53P02340 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tp53P02340 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tp53P02340 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tp53P02340 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tp53P02340 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tp53P02340 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.31■□□□□ 0.68
Tp53P02340 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tp53P02340 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.31■□□□□ 0.68
Tp53P02340 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tp53P02340 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tp53P02340 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tp53P02340 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tp53P02340 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tp53P02340 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tp53P02340 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tp53P02340 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tp53P02340 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tp53P02340 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tp53P02340 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Tp53P02340 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tp53P02340 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tp53P02340 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tp53P02340 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tp53P02340 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tp53P02340 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Tp53P02340 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tp53P02340 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Tp53P02340 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.3■□□□□ 0.68
Tp53P02340 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tp53P02340 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tp53P02340 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tp53P02340 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tp53P02340 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tp53P02340 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tp53P02340 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.3■□□□□ 0.68
Tp53P02340 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tp53P02340 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Tp53P02340 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tp53P02340 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tp53P02340 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
Tp53P02340 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tp53P02340 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Tp53P02340 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.29■□□□□ 0.68
Tp53P02340 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Tp53P02340 Gm37856-201ENSMUST00000191634 999 ntBASIC19.29■□□□□ 0.68
Tp53P02340 Gm10138-203ENSMUST00000206952 366 ntBASIC19.29■□□□□ 0.68
Tp53P02340 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tp53P02340 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.29■□□□□ 0.68
Tp53P02340 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Tp53P02340 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tp53P02340 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tp53P02340 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.29■□□□□ 0.68
Tp53P02340 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tp53P02340 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tp53P02340 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Tp53P02340 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.28■□□□□ 0.68
Tp53P02340 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.28■□□□□ 0.68
Tp53P02340 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tp53P02340 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Tp53P02340 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Tp53P02340 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Tp53P02340 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tp53P02340 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tp53P02340 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Tp53P02340 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tp53P02340 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
Tp53P02340 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.27■□□□□ 0.68
Tp53P02340 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.27■□□□□ 0.68
Tp53P02340 Gm22240-201ENSMUST00000175225 82 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms