Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H3f3cP02301 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H3f3cP02301 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
H3f3cP02301 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.34■□□□□ 0.05
H3f3cP02301 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H3f3cP02301 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H3f3cP02301 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
H3f3cP02301 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H3f3cP02301 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
H3f3cP02301 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H3f3cP02301 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
H3f3cP02301 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H3f3cP02301 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
H3f3cP02301 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.34■□□□□ 0.05
H3f3cP02301 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H3f3cP02301 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.34■□□□□ 0.05
H3f3cP02301 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
H3f3cP02301 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3f3cP02301 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
H3f3cP02301 Gm2399-201ENSMUST00000104944 225 ntBASIC15.33■□□□□ 0.04
H3f3cP02301 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.33■□□□□ 0.04
H3f3cP02301 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3f3cP02301 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.33■□□□□ 0.04
H3f3cP02301 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.33■□□□□ 0.04
H3f3cP02301 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
H3f3cP02301 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.33■□□□□ 0.04
H3f3cP02301 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.33■□□□□ 0.04
H3f3cP02301 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3f3cP02301 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3f3cP02301 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
H3f3cP02301 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
H3f3cP02301 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3f3cP02301 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.33■□□□□ 0.04
H3f3cP02301 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3f3cP02301 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3cP02301 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3cP02301 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.32■□□□□ 0.04
H3f3cP02301 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3cP02301 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3cP02301 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3cP02301 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3cP02301 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
H3f3cP02301 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3cP02301 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3cP02301 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3cP02301 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3cP02301 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.32■□□□□ 0.04
H3f3cP02301 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
H3f3cP02301 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
H3f3cP02301 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.32■□□□□ 0.04
H3f3cP02301 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.32■□□□□ 0.04
H3f3cP02301 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3cP02301 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3cP02301 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3cP02301 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3cP02301 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3cP02301 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.32■□□□□ 0.04
H3f3cP02301 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3f3cP02301 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
H3f3cP02301 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.31■□□□□ 0.04
H3f3cP02301 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H3f3cP02301 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H3f3cP02301 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H3f3cP02301 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H3f3cP02301 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
H3f3cP02301 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H3f3cP02301 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.31■□□□□ 0.04
H3f3cP02301 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.31■□□□□ 0.04
H3f3cP02301 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H3f3cP02301 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.31■□□□□ 0.04
H3f3cP02301 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
H3f3cP02301 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
H3f3cP02301 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
H3f3cP02301 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H3f3cP02301 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
H3f3cP02301 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
H3f3cP02301 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3f3cP02301 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H3f3cP02301 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3f3cP02301 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3f3cP02301 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3f3cP02301 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3f3cP02301 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.3■□□□□ 0.04
H3f3cP02301 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
H3f3cP02301 Gm2559-201ENSMUST00000201323 363 ntBASIC15.3■□□□□ 0.04
H3f3cP02301 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3f3cP02301 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3f3cP02301 Gm20049-201ENSMUST00000219950 730 ntBASIC15.3■□□□□ 0.04
H3f3cP02301 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3f3cP02301 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3f3cP02301 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3f3cP02301 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
H3f3cP02301 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
H3f3cP02301 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3f3cP02301 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3f3cP02301 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
H3f3cP02301 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H3f3cP02301 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H3f3cP02301 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
H3f3cP02301 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms