Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TcraP01849 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TcraP01849 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TcraP01849 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
TcraP01849 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC13.07□□□□□ -0.32
TcraP01849 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TcraP01849 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TcraP01849 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TcraP01849 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TcraP01849 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TcraP01849 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TcraP01849 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TcraP01849 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TcraP01849 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TcraP01849 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TcraP01849 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TcraP01849 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TcraP01849 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TcraP01849 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TcraP01849 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TcraP01849 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TcraP01849 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TcraP01849 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC13.06□□□□□ -0.32
TcraP01849 Serp2-204ENSMUST00000228055 705 ntBASIC13.06□□□□□ -0.32
TcraP01849 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TcraP01849 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC13.06□□□□□ -0.32
TcraP01849 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TcraP01849 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
TcraP01849 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TcraP01849 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
TcraP01849 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TcraP01849 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TcraP01849 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TcraP01849 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TcraP01849 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TcraP01849 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TcraP01849 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TcraP01849 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TcraP01849 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TcraP01849 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC13.05□□□□□ -0.32
TcraP01849 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TcraP01849 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TcraP01849 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TcraP01849 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TcraP01849 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TcraP01849 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TcraP01849 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TcraP01849 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TcraP01849 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TcraP01849 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.05□□□□□ -0.32
TcraP01849 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.05□□□□□ -0.32
TcraP01849 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TcraP01849 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TcraP01849 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TcraP01849 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TcraP01849 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
TcraP01849 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TcraP01849 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TcraP01849 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TcraP01849 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
TcraP01849 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TcraP01849 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.05□□□□□ -0.32
TcraP01849 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC13.05□□□□□ -0.32
TcraP01849 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TcraP01849 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TcraP01849 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TcraP01849 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TcraP01849 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TcraP01849 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TcraP01849 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TcraP01849 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.04□□□□□ -0.32
TcraP01849 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TcraP01849 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.04□□□□□ -0.32
TcraP01849 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC13.04□□□□□ -0.32
TcraP01849 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TcraP01849 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TcraP01849 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TcraP01849 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TcraP01849 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC13.04□□□□□ -0.32
TcraP01849 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TcraP01849 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TcraP01849 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TcraP01849 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TcraP01849 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TcraP01849 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TcraP01849 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TcraP01849 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TcraP01849 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TcraP01849 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TcraP01849 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TcraP01849 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC13.03□□□□□ -0.32
TcraP01849 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TcraP01849 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TcraP01849 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TcraP01849 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TcraP01849 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TcraP01849 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TcraP01849 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TcraP01849 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC13.03□□□□□ -0.32
TcraP01849 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms