Protein–RNA interactions for Protein: P01808

Ig heavy chain V region T601, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01808 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
P01808 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
P01808 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P01808 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
P01808 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P01808 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
P01808 Gm13158-201ENSMUST00000122007 736 ntBASIC16.19■□□□□ 0.18
P01808 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.19■□□□□ 0.18
P01808 Mir2861-201ENSMUST00000175539 82 ntBASIC16.19■□□□□ 0.18
P01808 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
P01808 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P01808 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
P01808 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P01808 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
P01808 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.18■□□□□ 0.18
P01808 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01808 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01808 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01808 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
P01808 Gm10138-203ENSMUST00000206952 366 ntBASIC16.18■□□□□ 0.18
P01808 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01808 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01808 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01808 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
P01808 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P01808 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
P01808 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01808 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01808 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
P01808 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.17■□□□□ 0.18
P01808 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
P01808 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01808 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01808 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01808 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01808 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01808 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01808 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
P01808 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
P01808 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01808 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01808 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
P01808 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
P01808 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
P01808 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
P01808 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
P01808 Gm27011-201ENSMUST00000182352 972 ntBASIC16.16■□□□□ 0.18
P01808 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01808 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.16■□□□□ 0.18
P01808 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.16■□□□□ 0.18
P01808 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
P01808 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
P01808 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
P01808 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.16■□□□□ 0.18
P01808 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
P01808 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
P01808 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
P01808 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01808 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01808 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.16■□□□□ 0.18
P01808 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01808 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
P01808 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P01808 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P01808 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P01808 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P01808 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
P01808 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P01808 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P01808 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P01808 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
P01808 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P01808 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
P01808 Gm15375-201ENSMUST00000119510 849 ntBASIC16.15■□□□□ 0.18
P01808 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P01808 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P01808 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P01808 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P01808 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
P01808 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P01808 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P01808 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
P01808 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
P01808 Rarb-207ENSMUST00000225921 2756 ntBASIC16.15■□□□□ 0.18
P01808 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
P01808 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
P01808 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
P01808 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P01808 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
P01808 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P01808 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P01808 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
P01808 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
P01808 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P01808 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P01808 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
P01808 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.14■□□□□ 0.17
P01808 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.14■□□□□ 0.17
P01808 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P01808 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms