Protein–RNA interactions for Protein: P01654

Ig kappa chain V-III region PC 2880/PC 1229, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01654 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
P01654 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
P01654 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
P01654 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
P01654 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P01654 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P01654 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.14■□□□□ 0.33
P01654 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
P01654 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01654 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.13■□□□□ 0.33
P01654 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01654 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
P01654 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.13■□□□□ 0.33
P01654 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P01654 Gm24841-201ENSMUST00000158676 357 ntBASIC17.13■□□□□ 0.33
P01654 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
P01654 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.13■□□□□ 0.33
P01654 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P01654 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01654 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01654 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P01654 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
P01654 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01654 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
P01654 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
P01654 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P01654 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01654 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P01654 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01654 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01654 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01654 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.12■□□□□ 0.33
P01654 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01654 Gm18959-201ENSMUST00000208954 655 ntBASIC17.12■□□□□ 0.33
P01654 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01654 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P01654 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01654 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
P01654 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01654 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P01654 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01654 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01654 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
P01654 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01654 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01654 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01654 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01654 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01654 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01654 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01654 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01654 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01654 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
P01654 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01654 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01654 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01654 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01654 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01654 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01654 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01654 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.11■□□□□ 0.33
P01654 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
P01654 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01654 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P01654 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01654 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01654 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.11■□□□□ 0.33
P01654 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
P01654 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01654 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01654 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01654 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01654 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P01654 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
P01654 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01654 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01654 Gm45058-201ENSMUST00000205810 766 ntBASIC17.1■□□□□ 0.33
P01654 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01654 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
P01654 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.1■□□□□ 0.33
P01654 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01654 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P01654 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.1■□□□□ 0.33
P01654 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01654 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P01654 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P01654 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01654 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.09■□□□□ 0.33
P01654 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01654 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P01654 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
P01654 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01654 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01654 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P01654 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01654 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P01654 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P01654 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01654 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01654 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms