Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.29■□□□□ 0.68
Vti1aO89116 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vti1aO89116 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vti1aO89116 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vti1aO89116 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vti1aO89116 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Vti1aO89116 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.28■□□□□ 0.68
Vti1aO89116 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Vti1aO89116 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.28■□□□□ 0.68
Vti1aO89116 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vti1aO89116 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Vti1aO89116 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Vti1aO89116 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vti1aO89116 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Vti1aO89116 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vti1aO89116 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Vti1aO89116 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.27■□□□□ 0.68
Vti1aO89116 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vti1aO89116 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.27■□□□□ 0.68
Vti1aO89116 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Vti1aO89116 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Vti1aO89116 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vti1aO89116 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.27■□□□□ 0.68
Vti1aO89116 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.27■□□□□ 0.68
Vti1aO89116 Gm9987-201ENSMUST00000069768 567 ntBASIC19.27■□□□□ 0.68
Vti1aO89116 Gm5417-201ENSMUST00000079706 384 ntBASIC19.27■□□□□ 0.68
Vti1aO89116 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Vti1aO89116 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Vti1aO89116 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Vti1aO89116 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vti1aO89116 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vti1aO89116 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vti1aO89116 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vti1aO89116 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vti1aO89116 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vti1aO89116 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vti1aO89116 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vti1aO89116 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vti1aO89116 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vti1aO89116 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.26■□□□□ 0.67
Vti1aO89116 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vti1aO89116 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vti1aO89116 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vti1aO89116 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vti1aO89116 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Vti1aO89116 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Vti1aO89116 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.25■□□□□ 0.67
Vti1aO89116 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vti1aO89116 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vti1aO89116 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Vti1aO89116 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vti1aO89116 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Vti1aO89116 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.25■□□□□ 0.67
Vti1aO89116 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vti1aO89116 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vti1aO89116 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vti1aO89116 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Vti1aO89116 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vti1aO89116 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vti1aO89116 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vti1aO89116 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Vti1aO89116 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vti1aO89116 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vti1aO89116 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Vti1aO89116 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vti1aO89116 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vti1aO89116 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vti1aO89116 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vti1aO89116 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vti1aO89116 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Vti1aO89116 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vti1aO89116 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vti1aO89116 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vti1aO89116 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vti1aO89116 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vti1aO89116 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vti1aO89116 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vti1aO89116 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vti1aO89116 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vti1aO89116 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vti1aO89116 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vti1aO89116 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Vti1aO89116 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vti1aO89116 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Vti1aO89116 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vti1aO89116 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Vti1aO89116 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Vti1aO89116 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vti1aO89116 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vti1aO89116 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Vti1aO89116 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Vti1aO89116 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vti1aO89116 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.23■□□□□ 0.67
Vti1aO89116 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vti1aO89116 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vti1aO89116 Zfp783-201ENSMUST00000095946 670 ntBASIC19.23■□□□□ 0.67
Vti1aO89116 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vti1aO89116 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vti1aO89116 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vti1aO89116 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms