Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Abcd4O89016 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Abcd4O89016 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Abcd4O89016 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Abcd4O89016 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Abcd4O89016 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Abcd4O89016 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Abcd4O89016 Mir6982-201ENSMUST00000184354 68 ntBASIC16.16■□□□□ 0.18
Abcd4O89016 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Abcd4O89016 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Abcd4O89016 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Abcd4O89016 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Abcd4O89016 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Abcd4O89016 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Abcd4O89016 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Abcd4O89016 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Abcd4O89016 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.15■□□□□ 0.18
Abcd4O89016 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Abcd4O89016 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.15■□□□□ 0.18
Abcd4O89016 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.15■□□□□ 0.18
Abcd4O89016 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Abcd4O89016 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Abcd4O89016 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Abcd4O89016 Gm15378-201ENSMUST00000121894 207 ntBASIC16.15■□□□□ 0.18
Abcd4O89016 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.15■□□□□ 0.18
Abcd4O89016 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.15■□□□□ 0.18
Abcd4O89016 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.15■□□□□ 0.18
Abcd4O89016 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Abcd4O89016 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Abcd4O89016 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Abcd4O89016 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Abcd4O89016 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Abcd4O89016 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Abcd4O89016 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abcd4O89016 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.14■□□□□ 0.17
Abcd4O89016 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abcd4O89016 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Abcd4O89016 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abcd4O89016 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.14■□□□□ 0.17
Abcd4O89016 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abcd4O89016 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Abcd4O89016 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abcd4O89016 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abcd4O89016 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abcd4O89016 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.14■□□□□ 0.17
Abcd4O89016 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abcd4O89016 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.14■□□□□ 0.17
Abcd4O89016 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Abcd4O89016 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.14■□□□□ 0.17
Abcd4O89016 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Abcd4O89016 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abcd4O89016 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abcd4O89016 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Abcd4O89016 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abcd4O89016 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Abcd4O89016 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abcd4O89016 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abcd4O89016 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Abcd4O89016 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Abcd4O89016 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Abcd4O89016 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Abcd4O89016 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Abcd4O89016 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Abcd4O89016 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Abcd4O89016 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Abcd4O89016 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Abcd4O89016 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Abcd4O89016 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Abcd4O89016 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Abcd4O89016 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Abcd4O89016 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Abcd4O89016 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Abcd4O89016 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Abcd4O89016 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Abcd4O89016 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Abcd4O89016 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Abcd4O89016 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Abcd4O89016 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Abcd4O89016 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Abcd4O89016 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Abcd4O89016 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.12■□□□□ 0.17
Abcd4O89016 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Abcd4O89016 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.12■□□□□ 0.17
Abcd4O89016 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.12■□□□□ 0.17
Abcd4O89016 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.12■□□□□ 0.17
Abcd4O89016 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Abcd4O89016 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Abcd4O89016 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Abcd4O89016 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Abcd4O89016 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Abcd4O89016 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abcd4O89016 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abcd4O89016 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abcd4O89016 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abcd4O89016 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abcd4O89016 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abcd4O89016 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abcd4O89016 Fst-202ENSMUST00000223640 2612 ntBASIC16.11■□□□□ 0.17
Abcd4O89016 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abcd4O89016 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms