Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Syn1O88935 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Syn1O88935 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Syn1O88935 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Syn1O88935 Gm9013-201ENSMUST00000132939 882 ntBASIC18.39■□□□□ 0.53
Syn1O88935 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Syn1O88935 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syn1O88935 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syn1O88935 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syn1O88935 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syn1O88935 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Syn1O88935 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syn1O88935 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syn1O88935 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syn1O88935 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syn1O88935 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syn1O88935 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Syn1O88935 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.38■□□□□ 0.53
Syn1O88935 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Syn1O88935 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.38■□□□□ 0.53
Syn1O88935 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.38■□□□□ 0.53
Syn1O88935 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Syn1O88935 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Syn1O88935 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Syn1O88935 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Syn1O88935 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.38■□□□□ 0.53
Syn1O88935 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Syn1O88935 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syn1O88935 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syn1O88935 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Syn1O88935 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syn1O88935 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syn1O88935 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Syn1O88935 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Syn1O88935 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syn1O88935 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Syn1O88935 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syn1O88935 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syn1O88935 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.37■□□□□ 0.53
Syn1O88935 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Syn1O88935 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syn1O88935 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Syn1O88935 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.36■□□□□ 0.53
Syn1O88935 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syn1O88935 Mir3081-201ENSMUST00000175305 84 ntBASIC18.36■□□□□ 0.53
Syn1O88935 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Syn1O88935 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.36■□□□□ 0.53
Syn1O88935 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.36■□□□□ 0.53
Syn1O88935 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.36■□□□□ 0.53
Syn1O88935 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Syn1O88935 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syn1O88935 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Syn1O88935 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syn1O88935 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syn1O88935 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syn1O88935 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syn1O88935 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syn1O88935 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syn1O88935 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syn1O88935 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syn1O88935 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syn1O88935 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syn1O88935 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syn1O88935 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Syn1O88935 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Syn1O88935 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syn1O88935 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Syn1O88935 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syn1O88935 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syn1O88935 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syn1O88935 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syn1O88935 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.34■□□□□ 0.53
Syn1O88935 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syn1O88935 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syn1O88935 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.34■□□□□ 0.53
Syn1O88935 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.34■□□□□ 0.53
Syn1O88935 AW822252-206ENSMUST00000208904 237 ntBASIC18.34■□□□□ 0.53
Syn1O88935 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Syn1O88935 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.34■□□□□ 0.53
Syn1O88935 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syn1O88935 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syn1O88935 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syn1O88935 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.34■□□□□ 0.53
Syn1O88935 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Syn1O88935 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Syn1O88935 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syn1O88935 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syn1O88935 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Syn1O88935 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Syn1O88935 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syn1O88935 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.33■□□□□ 0.53
Syn1O88935 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Syn1O88935 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Syn1O88935 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Syn1O88935 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Syn1O88935 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Syn1O88935 Gm13474-201ENSMUST00000122466 815 ntBASIC18.33■□□□□ 0.52
Syn1O88935 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.33■□□□□ 0.52
Syn1O88935 Gm18115-201ENSMUST00000221209 621 ntBASIC18.33■□□□□ 0.52
Syn1O88935 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms