Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.98■□□□□ 0.15
Hdac3O88895 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Hdac3O88895 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.98■□□□□ 0.15
Hdac3O88895 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hdac3O88895 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hdac3O88895 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hdac3O88895 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hdac3O88895 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hdac3O88895 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hdac3O88895 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hdac3O88895 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Hdac3O88895 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hdac3O88895 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hdac3O88895 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Hdac3O88895 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
Hdac3O88895 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Hdac3O88895 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hdac3O88895 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hdac3O88895 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hdac3O88895 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Hdac3O88895 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.97■□□□□ 0.15
Hdac3O88895 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Hdac3O88895 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.97■□□□□ 0.15
Hdac3O88895 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hdac3O88895 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Hdac3O88895 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hdac3O88895 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hdac3O88895 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Hdac3O88895 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hdac3O88895 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hdac3O88895 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hdac3O88895 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hdac3O88895 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Hdac3O88895 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hdac3O88895 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hdac3O88895 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Hdac3O88895 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hdac3O88895 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Hdac3O88895 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hdac3O88895 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hdac3O88895 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hdac3O88895 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.96■□□□□ 0.15
Hdac3O88895 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Hdac3O88895 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Hdac3O88895 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hdac3O88895 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hdac3O88895 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hdac3O88895 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hdac3O88895 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.95■□□□□ 0.14
Hdac3O88895 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hdac3O88895 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Hdac3O88895 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hdac3O88895 Nespas-201ENSMUST00000143738 1083 ntBASIC15.95■□□□□ 0.14
Hdac3O88895 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.95■□□□□ 0.14
Hdac3O88895 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Hdac3O88895 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hdac3O88895 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.95■□□□□ 0.14
Hdac3O88895 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hdac3O88895 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hdac3O88895 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hdac3O88895 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Hdac3O88895 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hdac3O88895 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hdac3O88895 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hdac3O88895 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hdac3O88895 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.94■□□□□ 0.14
Hdac3O88895 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hdac3O88895 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hdac3O88895 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hdac3O88895 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hdac3O88895 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hdac3O88895 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hdac3O88895 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hdac3O88895 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Hdac3O88895 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.94■□□□□ 0.14
Hdac3O88895 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Hdac3O88895 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Hdac3O88895 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Hdac3O88895 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hdac3O88895 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Hdac3O88895 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Hdac3O88895 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hdac3O88895 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hdac3O88895 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hdac3O88895 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Hdac3O88895 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hdac3O88895 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hdac3O88895 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hdac3O88895 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Hdac3O88895 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hdac3O88895 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.93■□□□□ 0.14
Hdac3O88895 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Hdac3O88895 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Hdac3O88895 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Hdac3O88895 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.93■□□□□ 0.14
Hdac3O88895 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.93■□□□□ 0.14
Hdac3O88895 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hdac3O88895 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Hdac3O88895 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hdac3O88895 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms