Protein–RNA interactions for Protein: O88888

Apba3, Amyloid-beta A4 precursor protein-binding family A member 3, mousemouse

Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apba3O88888 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Apba3O88888 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.56■□□□□ 0.72
Apba3O88888 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Apba3O88888 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.56■□□□□ 0.72
Apba3O88888 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Apba3O88888 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Apba3O88888 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Apba3O88888 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Apba3O88888 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Apba3O88888 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Apba3O88888 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Apba3O88888 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Apba3O88888 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.55■□□□□ 0.72
Apba3O88888 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Apba3O88888 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Apba3O88888 Gm21814-202ENSMUST00000203277 873 ntBASIC19.55■□□□□ 0.72
Apba3O88888 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.55■□□□□ 0.72
Apba3O88888 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.55■□□□□ 0.72
Apba3O88888 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Apba3O88888 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Apba3O88888 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Apba3O88888 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Apba3O88888 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Apba3O88888 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Apba3O88888 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.55■□□□□ 0.72
Apba3O88888 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Apba3O88888 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Apba3O88888 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Apba3O88888 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Apba3O88888 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Apba3O88888 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Apba3O88888 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Apba3O88888 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Apba3O88888 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.54■□□□□ 0.72
Apba3O88888 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Apba3O88888 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Apba3O88888 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Apba3O88888 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Apba3O88888 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Apba3O88888 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Apba3O88888 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Apba3O88888 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Apba3O88888 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Apba3O88888 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Apba3O88888 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Apba3O88888 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Apba3O88888 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Apba3O88888 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Apba3O88888 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Apba3O88888 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Apba3O88888 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Apba3O88888 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Apba3O88888 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Apba3O88888 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Apba3O88888 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Apba3O88888 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Apba3O88888 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Apba3O88888 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Apba3O88888 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Apba3O88888 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Apba3O88888 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Apba3O88888 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.52■□□□□ 0.72
Apba3O88888 Gm43799-201ENSMUST00000201845 579 ntBASIC19.52■□□□□ 0.72
Apba3O88888 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.52■□□□□ 0.72
Apba3O88888 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Apba3O88888 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Apba3O88888 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Apba3O88888 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Apba3O88888 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Apba3O88888 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Apba3O88888 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Apba3O88888 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Apba3O88888 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Apba3O88888 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Apba3O88888 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Apba3O88888 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Apba3O88888 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Apba3O88888 Gm13836-201ENSMUST00000121159 501 ntBASIC19.51■□□□□ 0.71
Apba3O88888 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Apba3O88888 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.51■□□□□ 0.71
Apba3O88888 Gm10517-202ENSMUST00000192970 758 ntBASIC19.51■□□□□ 0.71
Apba3O88888 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.51■□□□□ 0.71
Apba3O88888 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Apba3O88888 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Apba3O88888 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Apba3O88888 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Apba3O88888 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.51■□□□□ 0.71
Apba3O88888 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Apba3O88888 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Apba3O88888 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Apba3O88888 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Apba3O88888 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Apba3O88888 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.5■□□□□ 0.71
Apba3O88888 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Apba3O88888 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.5■□□□□ 0.71
Apba3O88888 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.5■□□□□ 0.71
Apba3O88888 Gm3375-201ENSMUST00000203929 796 ntBASIC19.5■□□□□ 0.71
Apba3O88888 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.5■□□□□ 0.71
Apba3O88888 Gm30025-201ENSMUST00000218555 728 ntBASIC19.5■□□□□ 0.71
Apba3O88888 Timm23-208ENSMUST00000226683 750 ntBASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms