Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.94■□□□□ 0.46
Dnmt3aO88508 Gm10653-202ENSMUST00000139570 835 ntBASIC17.94■□□□□ 0.46
Dnmt3aO88508 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Dnmt3aO88508 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Dnmt3aO88508 Gm37856-201ENSMUST00000191634 999 ntBASIC17.94■□□□□ 0.46
Dnmt3aO88508 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Dnmt3aO88508 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Dnmt3aO88508 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Dnmt3aO88508 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Dnmt3aO88508 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Dnmt3aO88508 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Dnmt3aO88508 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.93■□□□□ 0.46
Dnmt3aO88508 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Dnmt3aO88508 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Dnmt3aO88508 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Dnmt3aO88508 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Dnmt3aO88508 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Dnmt3aO88508 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Dnmt3aO88508 Gm27275-201ENSMUST00000184318 272 ntBASIC17.93■□□□□ 0.46
Dnmt3aO88508 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Dnmt3aO88508 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Dnmt3aO88508 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.93■□□□□ 0.46
Dnmt3aO88508 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Dnmt3aO88508 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
Dnmt3aO88508 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Dnmt3aO88508 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Dnmt3aO88508 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Dnmt3aO88508 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Dnmt3aO88508 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Dnmt3aO88508 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Dnmt3aO88508 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Dnmt3aO88508 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.92■□□□□ 0.46
Dnmt3aO88508 Gm27011-201ENSMUST00000182352 972 ntBASIC17.92■□□□□ 0.46
Dnmt3aO88508 Trmt13-210ENSMUST00000198454 880 ntBASIC17.92■□□□□ 0.46
Dnmt3aO88508 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Dnmt3aO88508 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.92■□□□□ 0.46
Dnmt3aO88508 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Dnmt3aO88508 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Dnmt3aO88508 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Dnmt3aO88508 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Dnmt3aO88508 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Dnmt3aO88508 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Dnmt3aO88508 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Dnmt3aO88508 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Dnmt3aO88508 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Dnmt3aO88508 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Dnmt3aO88508 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Dnmt3aO88508 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Dnmt3aO88508 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Dnmt3aO88508 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Dnmt3aO88508 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Dnmt3aO88508 Fst-202ENSMUST00000223640 2612 ntBASIC17.91■□□□□ 0.46
Dnmt3aO88508 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Dnmt3aO88508 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Dnmt3aO88508 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Dnmt3aO88508 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Dnmt3aO88508 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Dnmt3aO88508 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Dnmt3aO88508 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Dnmt3aO88508 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Dnmt3aO88508 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Dnmt3aO88508 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.9■□□□□ 0.46
Dnmt3aO88508 Zfp783-201ENSMUST00000095946 670 ntBASIC17.9■□□□□ 0.46
Dnmt3aO88508 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Dnmt3aO88508 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Dnmt3aO88508 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.9■□□□□ 0.46
Dnmt3aO88508 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.89■□□□□ 0.46
Dnmt3aO88508 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Dnmt3aO88508 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Dnmt3aO88508 Gm11249-201ENSMUST00000117071 859 ntBASIC17.89■□□□□ 0.45
Dnmt3aO88508 Gm11927-201ENSMUST00000118472 759 ntBASIC17.89■□□□□ 0.45
Dnmt3aO88508 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Dnmt3aO88508 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Dnmt3aO88508 Gm20760-201ENSMUST00000179197 648 ntBASIC17.89■□□□□ 0.45
Dnmt3aO88508 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Dnmt3aO88508 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.89■□□□□ 0.45
Dnmt3aO88508 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.89■□□□□ 0.45
Dnmt3aO88508 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Dnmt3aO88508 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.89■□□□□ 0.45
Dnmt3aO88508 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.89■□□□□ 0.45
Dnmt3aO88508 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Dnmt3aO88508 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Dnmt3aO88508 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Dnmt3aO88508 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Dnmt3aO88508 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Dnmt3aO88508 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Dnmt3aO88508 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Dnmt3aO88508 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Dnmt3aO88508 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Dnmt3aO88508 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Dnmt3aO88508 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Dnmt3aO88508 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Dnmt3aO88508 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Dnmt3aO88508 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.88■□□□□ 0.45
Dnmt3aO88508 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.88■□□□□ 0.45
Dnmt3aO88508 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Dnmt3aO88508 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Dnmt3aO88508 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Dnmt3aO88508 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Dnmt3aO88508 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms