Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf17O88472 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf17O88472 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.61■□□□□ 0.25
Tnfrsf17O88472 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf17O88472 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf17O88472 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf17O88472 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf17O88472 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Tnfrsf17O88472 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf17O88472 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf17O88472 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf17O88472 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Tnfrsf17O88472 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf17O88472 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf17O88472 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Tnfrsf17O88472 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Tnfrsf17O88472 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.6■□□□□ 0.25
Tnfrsf17O88472 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf17O88472 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.6■□□□□ 0.25
Tnfrsf17O88472 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf17O88472 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.6■□□□□ 0.25
Tnfrsf17O88472 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf17O88472 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf17O88472 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf17O88472 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf17O88472 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.59■□□□□ 0.25
Tnfrsf17O88472 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf17O88472 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.59■□□□□ 0.25
Tnfrsf17O88472 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Tnfrsf17O88472 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf17O88472 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.59■□□□□ 0.25
Tnfrsf17O88472 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.59■□□□□ 0.25
Tnfrsf17O88472 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.59■□□□□ 0.25
Tnfrsf17O88472 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf17O88472 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Tnfrsf17O88472 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.59■□□□□ 0.25
Tnfrsf17O88472 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf17O88472 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf17O88472 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf17O88472 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf17O88472 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf17O88472 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf17O88472 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.59■□□□□ 0.25
Tnfrsf17O88472 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf17O88472 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Tnfrsf17O88472 Gm11355-201ENSMUST00000121120 306 ntBASIC16.58■□□□□ 0.24
Tnfrsf17O88472 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.58■□□□□ 0.24
Tnfrsf17O88472 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf17O88472 Gm27742-201ENSMUST00000184667 60 ntBASIC16.58■□□□□ 0.24
Tnfrsf17O88472 Gm5864-201ENSMUST00000202263 970 ntBASIC16.58■□□□□ 0.24
Tnfrsf17O88472 Gm7791-201ENSMUST00000219066 539 ntBASIC16.58■□□□□ 0.24
Tnfrsf17O88472 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf17O88472 Birc2-201ENSMUST00000054878 378 ntBASIC16.58■□□□□ 0.24
Tnfrsf17O88472 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf17O88472 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf17O88472 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf17O88472 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf17O88472 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.58■□□□□ 0.24
Tnfrsf17O88472 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf17O88472 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf17O88472 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Tnfrsf17O88472 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.57■□□□□ 0.24
Tnfrsf17O88472 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfrsf17O88472 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.57■□□□□ 0.24
Tnfrsf17O88472 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfrsf17O88472 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.57■□□□□ 0.24
Tnfrsf17O88472 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfrsf17O88472 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.57■□□□□ 0.24
Tnfrsf17O88472 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfrsf17O88472 Gm37935-201ENSMUST00000192012 982 ntBASIC16.57■□□□□ 0.24
Tnfrsf17O88472 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfrsf17O88472 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.57■□□□□ 0.24
Tnfrsf17O88472 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfrsf17O88472 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfrsf17O88472 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Tnfrsf17O88472 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfrsf17O88472 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tnfrsf17O88472 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tnfrsf17O88472 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tnfrsf17O88472 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Tnfrsf17O88472 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tnfrsf17O88472 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tnfrsf17O88472 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.56■□□□□ 0.24
Tnfrsf17O88472 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.56■□□□□ 0.24
Tnfrsf17O88472 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.56■□□□□ 0.24
Tnfrsf17O88472 Gm4974-201ENSMUST00000209974 875 ntBASIC16.56■□□□□ 0.24
Tnfrsf17O88472 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tnfrsf17O88472 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tnfrsf17O88472 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tnfrsf17O88472 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tnfrsf17O88472 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tnfrsf17O88472 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Tnfrsf17O88472 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tnfrsf17O88472 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Tnfrsf17O88472 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tnfrsf17O88472 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tnfrsf17O88472 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tnfrsf17O88472 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Tnfrsf17O88472 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tnfrsf17O88472 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms