Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1hO88427 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1hO88427 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1hO88427 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1hO88427 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1hO88427 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.45■□□□□ 0.38
Cacna1hO88427 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1hO88427 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1hO88427 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1hO88427 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1hO88427 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1hO88427 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1hO88427 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1hO88427 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cacna1hO88427 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Cacna1hO88427 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cacna1hO88427 Gm5264-201ENSMUST00000190584 848 ntBASIC17.44■□□□□ 0.38
Cacna1hO88427 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1hO88427 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cacna1hO88427 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1hO88427 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1hO88427 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1hO88427 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1hO88427 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1hO88427 Gm6736-201ENSMUST00000166583 948 ntBASIC17.44■□□□□ 0.38
Cacna1hO88427 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1hO88427 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.44■□□□□ 0.38
Cacna1hO88427 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.44■□□□□ 0.38
Cacna1hO88427 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.44■□□□□ 0.38
Cacna1hO88427 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1hO88427 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1hO88427 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cacna1hO88427 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cacna1hO88427 Gm10566-201ENSMUST00000086739 996 ntBASIC17.44■□□□□ 0.38
Cacna1hO88427 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
Cacna1hO88427 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
Cacna1hO88427 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1hO88427 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Cacna1hO88427 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1hO88427 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1hO88427 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1hO88427 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.43■□□□□ 0.38
Cacna1hO88427 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Cacna1hO88427 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1hO88427 Gm4974-201ENSMUST00000209974 875 ntBASIC17.43■□□□□ 0.38
Cacna1hO88427 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1hO88427 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1hO88427 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1hO88427 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.43■□□□□ 0.38
Cacna1hO88427 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1hO88427 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Cacna1hO88427 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.43■□□□□ 0.38
Cacna1hO88427 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1hO88427 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1hO88427 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1hO88427 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cacna1hO88427 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cacna1hO88427 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Cacna1hO88427 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cacna1hO88427 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.42■□□□□ 0.38
Cacna1hO88427 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Cacna1hO88427 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cacna1hO88427 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.42■□□□□ 0.38
Cacna1hO88427 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cacna1hO88427 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.42■□□□□ 0.38
Cacna1hO88427 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cacna1hO88427 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cacna1hO88427 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1hO88427 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1hO88427 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1hO88427 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1hO88427 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Cacna1hO88427 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1hO88427 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1hO88427 Gm23935-201ENSMUST00000102303 57 ntBASIC17.41■□□□□ 0.38
Cacna1hO88427 Gm24270-201ENSMUST00000102326 57 ntBASIC17.41■□□□□ 0.38
Cacna1hO88427 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1hO88427 Gm24245-201ENSMUST00000157318 57 ntBASIC17.41■□□□□ 0.38
Cacna1hO88427 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.41■□□□□ 0.38
Cacna1hO88427 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
Cacna1hO88427 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cacna1hO88427 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.41■□□□□ 0.38
Cacna1hO88427 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1hO88427 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Cacna1hO88427 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1hO88427 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1hO88427 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1hO88427 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1hO88427 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cacna1hO88427 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.4■□□□□ 0.38
Cacna1hO88427 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cacna1hO88427 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cacna1hO88427 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cacna1hO88427 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cacna1hO88427 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cacna1hO88427 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cacna1hO88427 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cacna1hO88427 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.4■□□□□ 0.38
Cacna1hO88427 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cacna1hO88427 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms