Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vti1bO88384 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vti1bO88384 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vti1bO88384 Gm6420-201ENSMUST00000193885 723 ntBASIC17.05■□□□□ 0.32
Vti1bO88384 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Vti1bO88384 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vti1bO88384 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vti1bO88384 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vti1bO88384 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vti1bO88384 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vti1bO88384 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vti1bO88384 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1bO88384 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1bO88384 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1bO88384 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1bO88384 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1bO88384 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1bO88384 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Vti1bO88384 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1bO88384 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Vti1bO88384 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1bO88384 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1bO88384 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1bO88384 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1bO88384 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vti1bO88384 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vti1bO88384 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Vti1bO88384 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vti1bO88384 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
Vti1bO88384 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vti1bO88384 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vti1bO88384 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.03■□□□□ 0.32
Vti1bO88384 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.03■□□□□ 0.32
Vti1bO88384 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vti1bO88384 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Vti1bO88384 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vti1bO88384 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vti1bO88384 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vti1bO88384 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.03■□□□□ 0.32
Vti1bO88384 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.02■□□□□ 0.32
Vti1bO88384 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vti1bO88384 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Vti1bO88384 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vti1bO88384 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vti1bO88384 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Vti1bO88384 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vti1bO88384 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.02■□□□□ 0.32
Vti1bO88384 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vti1bO88384 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.02■□□□□ 0.32
Vti1bO88384 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vti1bO88384 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vti1bO88384 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vti1bO88384 Gm7291-201ENSMUST00000199147 382 ntBASIC17.02■□□□□ 0.32
Vti1bO88384 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.02■□□□□ 0.32
Vti1bO88384 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.02■□□□□ 0.32
Vti1bO88384 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Vti1bO88384 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vti1bO88384 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Vti1bO88384 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vti1bO88384 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vti1bO88384 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Vti1bO88384 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Vti1bO88384 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vti1bO88384 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vti1bO88384 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vti1bO88384 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vti1bO88384 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vti1bO88384 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vti1bO88384 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Vti1bO88384 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.01■□□□□ 0.31
Vti1bO88384 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vti1bO88384 Nespas-201ENSMUST00000143738 1083 ntBASIC17.01■□□□□ 0.31
Vti1bO88384 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.01■□□□□ 0.31
Vti1bO88384 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.01■□□□□ 0.31
Vti1bO88384 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vti1bO88384 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Vti1bO88384 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Vti1bO88384 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Vti1bO88384 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vti1bO88384 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vti1bO88384 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Vti1bO88384 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Vti1bO88384 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Vti1bO88384 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.01■□□□□ 0.31
Vti1bO88384 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Vti1bO88384 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vti1bO88384 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vti1bO88384 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Vti1bO88384 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Vti1bO88384 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Vti1bO88384 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Vti1bO88384 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Vti1bO88384 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17■□□□□ 0.31
Vti1bO88384 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vti1bO88384 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Vti1bO88384 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Vti1bO88384 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Vti1bO88384 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Vti1bO88384 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vti1bO88384 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms