Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
IkbkbO88351 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
IkbkbO88351 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
IkbkbO88351 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IkbkbO88351 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
IkbkbO88351 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IkbkbO88351 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IkbkbO88351 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IkbkbO88351 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IkbkbO88351 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
IkbkbO88351 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
IkbkbO88351 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
IkbkbO88351 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
IkbkbO88351 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
IkbkbO88351 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.75■□□□□ 0.75
IkbkbO88351 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
IkbkbO88351 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IkbkbO88351 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.74■□□□□ 0.75
IkbkbO88351 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
IkbkbO88351 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.74■□□□□ 0.75
IkbkbO88351 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.74■□□□□ 0.75
IkbkbO88351 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IkbkbO88351 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
IkbkbO88351 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IkbkbO88351 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
IkbkbO88351 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.74■□□□□ 0.75
IkbkbO88351 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
IkbkbO88351 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
IkbkbO88351 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
IkbkbO88351 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
IkbkbO88351 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IkbkbO88351 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IkbkbO88351 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IkbkbO88351 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IkbkbO88351 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
IkbkbO88351 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.73■□□□□ 0.75
IkbkbO88351 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IkbkbO88351 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.73■□□□□ 0.75
IkbkbO88351 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.73■□□□□ 0.75
IkbkbO88351 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
IkbkbO88351 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IkbkbO88351 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IkbkbO88351 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IkbkbO88351 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IkbkbO88351 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IkbkbO88351 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.73■□□□□ 0.75
IkbkbO88351 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IkbkbO88351 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.72■□□□□ 0.75
IkbkbO88351 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
IkbkbO88351 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IkbkbO88351 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IkbkbO88351 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IkbkbO88351 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
IkbkbO88351 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IkbkbO88351 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IkbkbO88351 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IkbkbO88351 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.71■□□□□ 0.75
IkbkbO88351 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IkbkbO88351 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IkbkbO88351 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
IkbkbO88351 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
IkbkbO88351 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
IkbkbO88351 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IkbkbO88351 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IkbkbO88351 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IkbkbO88351 Gm2399-201ENSMUST00000104944 225 ntBASIC19.71■□□□□ 0.75
IkbkbO88351 Gm11249-201ENSMUST00000117071 859 ntBASIC19.71■□□□□ 0.75
IkbkbO88351 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
IkbkbO88351 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
IkbkbO88351 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
IkbkbO88351 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
IkbkbO88351 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
IkbkbO88351 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
IkbkbO88351 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IkbkbO88351 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
IkbkbO88351 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.7■□□□□ 0.74
IkbkbO88351 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IkbkbO88351 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IkbkbO88351 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.7■□□□□ 0.74
IkbkbO88351 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
IkbkbO88351 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IkbkbO88351 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.7■□□□□ 0.74
IkbkbO88351 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.7■□□□□ 0.74
IkbkbO88351 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
IkbkbO88351 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
IkbkbO88351 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.69■□□□□ 0.74
IkbkbO88351 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
IkbkbO88351 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
IkbkbO88351 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IkbkbO88351 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IkbkbO88351 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.69■□□□□ 0.74
IkbkbO88351 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
IkbkbO88351 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IkbkbO88351 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IkbkbO88351 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
IkbkbO88351 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IkbkbO88351 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
IkbkbO88351 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IkbkbO88351 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IkbkbO88351 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms