Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Pknox1O70477 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.77■□□□□ 0.44
Pknox1O70477 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.77■□□□□ 0.44
Pknox1O70477 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pknox1O70477 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pknox1O70477 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pknox1O70477 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pknox1O70477 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pknox1O70477 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pknox1O70477 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pknox1O70477 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
Pknox1O70477 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pknox1O70477 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.76■□□□□ 0.43
Pknox1O70477 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.76■□□□□ 0.43
Pknox1O70477 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pknox1O70477 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pknox1O70477 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.76■□□□□ 0.43
Pknox1O70477 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pknox1O70477 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.76■□□□□ 0.43
Pknox1O70477 AV356131-201ENSMUST00000206201 750 ntBASIC17.76■□□□□ 0.43
Pknox1O70477 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pknox1O70477 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pknox1O70477 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pknox1O70477 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pknox1O70477 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Pknox1O70477 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pknox1O70477 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pknox1O70477 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pknox1O70477 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pknox1O70477 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pknox1O70477 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pknox1O70477 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pknox1O70477 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pknox1O70477 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pknox1O70477 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pknox1O70477 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Pknox1O70477 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pknox1O70477 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pknox1O70477 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.75■□□□□ 0.43
Pknox1O70477 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.75■□□□□ 0.43
Pknox1O70477 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pknox1O70477 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pknox1O70477 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pknox1O70477 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pknox1O70477 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pknox1O70477 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Pknox1O70477 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
Pknox1O70477 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pknox1O70477 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pknox1O70477 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pknox1O70477 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.74■□□□□ 0.43
Pknox1O70477 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.74■□□□□ 0.43
Pknox1O70477 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pknox1O70477 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pknox1O70477 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pknox1O70477 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pknox1O70477 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pknox1O70477 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.74■□□□□ 0.43
Pknox1O70477 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pknox1O70477 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pknox1O70477 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pknox1O70477 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.73■□□□□ 0.43
Pknox1O70477 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pknox1O70477 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.73■□□□□ 0.43
Pknox1O70477 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pknox1O70477 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pknox1O70477 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pknox1O70477 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.73■□□□□ 0.43
Pknox1O70477 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pknox1O70477 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pknox1O70477 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pknox1O70477 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pknox1O70477 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pknox1O70477 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.73■□□□□ 0.43
Pknox1O70477 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pknox1O70477 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pknox1O70477 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pknox1O70477 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pknox1O70477 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.73■□□□□ 0.43
Pknox1O70477 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pknox1O70477 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pknox1O70477 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.72■□□□□ 0.43
Pknox1O70477 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.72■□□□□ 0.43
Pknox1O70477 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pknox1O70477 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pknox1O70477 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pknox1O70477 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pknox1O70477 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.72■□□□□ 0.43
Pknox1O70477 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.72■□□□□ 0.43
Pknox1O70477 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pknox1O70477 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Pknox1O70477 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pknox1O70477 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pknox1O70477 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.72■□□□□ 0.43
Pknox1O70477 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pknox1O70477 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Pknox1O70477 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pknox1O70477 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.71■□□□□ 0.43
Pknox1O70477 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.71■□□□□ 0.43
Pknox1O70477 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms