Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.63■□□□□ 0.41
Pdlim1O70400 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim1O70400 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pdlim1O70400 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim1O70400 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim1O70400 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Pdlim1O70400 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Pdlim1O70400 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim1O70400 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim1O70400 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim1O70400 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pdlim1O70400 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim1O70400 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim1O70400 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Pdlim1O70400 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pdlim1O70400 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pdlim1O70400 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.62■□□□□ 0.41
Pdlim1O70400 Gm15378-201ENSMUST00000121894 207 ntBASIC17.62■□□□□ 0.41
Pdlim1O70400 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.62■□□□□ 0.41
Pdlim1O70400 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim1O70400 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim1O70400 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pdlim1O70400 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pdlim1O70400 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim1O70400 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim1O70400 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pdlim1O70400 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim1O70400 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim1O70400 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim1O70400 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim1O70400 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim1O70400 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim1O70400 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.62■□□□□ 0.41
Pdlim1O70400 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim1O70400 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim1O70400 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.61■□□□□ 0.41
Pdlim1O70400 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim1O70400 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim1O70400 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim1O70400 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pdlim1O70400 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim1O70400 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.61■□□□□ 0.41
Pdlim1O70400 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.61■□□□□ 0.41
Pdlim1O70400 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.61■□□□□ 0.41
Pdlim1O70400 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Pdlim1O70400 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pdlim1O70400 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim1O70400 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim1O70400 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Pdlim1O70400 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim1O70400 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim1O70400 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Pdlim1O70400 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pdlim1O70400 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pdlim1O70400 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim1O70400 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim1O70400 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pdlim1O70400 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim1O70400 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.6■□□□□ 0.41
Pdlim1O70400 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim1O70400 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Pdlim1O70400 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Pdlim1O70400 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim1O70400 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.6■□□□□ 0.41
Pdlim1O70400 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim1O70400 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim1O70400 Gm18025-201ENSMUST00000221733 862 ntBASIC17.6■□□□□ 0.41
Pdlim1O70400 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim1O70400 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim1O70400 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim1O70400 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim1O70400 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim1O70400 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Pdlim1O70400 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim1O70400 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim1O70400 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim1O70400 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim1O70400 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim1O70400 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim1O70400 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim1O70400 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim1O70400 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim1O70400 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.59■□□□□ 0.41
Pdlim1O70400 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim1O70400 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.59■□□□□ 0.41
Pdlim1O70400 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim1O70400 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.59■□□□□ 0.41
Pdlim1O70400 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim1O70400 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim1O70400 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Pdlim1O70400 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.59■□□□□ 0.41
Pdlim1O70400 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.59■□□□□ 0.41
Pdlim1O70400 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim1O70400 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim1O70400 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pdlim1O70400 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pdlim1O70400 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
Pdlim1O70400 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Pdlim1O70400 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Pdlim1O70400 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 502.5 ms